Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00322 ATGCCGCAGGATTCGTCCGAACAAGAACTAGACGATGCGGATGCTGAATTCGCCGAGATTGACCCCAGCGGTCGATATGGTCGGTACAAAGAGGTATTGGGGAAGGGGGCTTTCAAGAAAGTATATCGAGCATTTGATGAGTTGGAAGGAATCGAAGTGGCCTGGAATCAGGTCAAAGTGGCAGATCTATTGCGCAAATCTGAAGATTTGGAGCGCCTACATTCAGAAGTTCATTTGCTGAAGACTTTGAAgcataaaaacataattaaattttacaattcatGGGTTGATACGAAGAATGATAGCATCAACTTCATTACTGAAATTTTCACGTCGGGGACATTACGCCAGTATCGGAAGAAGCACAAGTGTGTTGATTTAAGAGCGCTGAAGAAATGGTCTAGGCAGATTTTGGAGGGTCTTTACTATCTTCACAGTCATGACCCGCCTGTTATTCACCGGGATCTGAAGTGTGACAACATTTTTGTCAATGGGAATCAAGGTGAGGTGAAAATTGGTGACTTAGGATTGGCAGCTATTCTTCAGCAGGCCCATTCAGCTCACAGTGTCATAGGAACTCCAGAATTTATGGCACCAGAACTCTATGAAGAGGAATATAATGAGCTTGTTGACATCTATGCTTTCGGCATGTGCTTGCTAGAGTTGGTAACATTCGAGTACCCATATGTTGAATGTGCCAATGCTGctcaaatatttaagaaagtgACATCTGGAATAAAGCCAGCATCATTGTCGAAAGTGGCAGACCCTGGAGTCAAAGCATTTATTGAGAAGTGTATTGCAAATGCTTCTGAACGATTGTCTGCAAAGGATCTCTTAATGGATCCCTTTCTTCACTCAGATGATGGTGTTGATCGTTCTTTATGGCCTAAGACCAATCATTTGGGACGTTACGATGATCATCATGCCATTGGTAAAAATGCTGAGGATAATTTGGGAGAGACTAGTAGGGAATTCACAGTGGAAGGGCAAAGGAGAGATTTGAATACCATATTTCTGAAACTGCGAATAGCAGATTCCTTAGGTCATATACGCAATATCCACTTTCCCTTTGATATTGAGGAAGATACTGCGATTGCTGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACTGACCAAGATGTTACAACTATTGCTGAGATTATTGATTCAGAAATTCGAGATCATATTCCGGATTGGAATCCCAGAGACCATCATATCGATGGTTTTGGTCAAGAGTTAGCAGTTTCAGGTAGCTGTCCCTTTGAAACTAAGGGAGGGGCATCTTCCGTGGGAATTGAGTCTCCCTCTTCTCTTGCTAATCTTGCACTAGAAAGATTACCTTCAGGTCGTAAGTATTGGTCTGACTCAGCCAAGGCAGGTGGGAACTCCCCATCAAGGCTAGGTGCTTCAAACTTGTCTTCTCAAGTGGATCTGAACGCTGAGGGGGATGAATCCACGGCAAAAGGTGCGATTTCATCTGAGCAGCCAGTTTGCAAGTACAGCAGTGCTGGTGATTGCAGTGCGGAGAAGGAATCTGGTGATTCTGCTGATTCCAATTTCTGTGAGAGAAGTATTACATCTGGGGATTTACACACAATCAATAGAGAATCTCCTTTGGGAGAGGAGTCTGAAAGATTGGAAGACTCTGAATTAGAAGATATAAATATAGTTTCTGAAAAACTGTTCAATCTGTTGGCAAGACAGAAGGAAGAGTTAGATGAACTTAAGAGGAAGCATAACTTAGCTGTCGCAGATCTTCTGGATGAACTTTCTCCAGAAATGCGTGAAAAAGTCTTAAATGTGTGTAATATGAAGTTACCTGACGGTGGATACGTATA 1844 0.4192 MPQDSSEQELDDADAEFAEIDPSGRYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRKSEDLERLHSEVHLLKTLKHKNIIKFYNSWVDTKNDSINFITEIFTSGTLRQYRKKHKCVDLRALKKWSRQILEGLYYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQAHSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTFEYPYVECANAAQIFKKVTSGIKPASLSKVADPGVKAFIEKCIANASERLSAKDLLMDPFLHSDDGVDRSLWPKTNHLGRYDDHHAIGKNAEDNLGETSREFTVEGQRRDLNTIFLKLRIADSLGHIRNIHFPFDIEEDTAIAVASEMVEELELTDQDVTTIAEIIDSEIRDHIPDWNPRDHHIDGFGQELAVSGSCPFETKGGASSVGIESPSSLANLALERLPSGRKYWSDSAKAGGNSPSRLGASNLSSQVDLNAEGDESTAKGAISSEQPVCKYSSAGDCSAEKESGDSADSNFCERSITSGDLHTINRESPLGEESERLEDSELEDINIVSEKLFNLLARQKEELDELKRKHNLAVADLLDELSPEMREKVLNVCNMKLPDGGYV 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00322 614 Gene3D - 336 408 - -
Bva05g00322 614 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Bva05g00322 614 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 609 - -
Bva05g00322 614 CDD STKc_WNK 25 285 - -
Bva05g00322 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 609 - -
Bva05g00322 614 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00322 614 SUPERFAMILY Protein kinase-like (PK-like) 29 297 IPR011009 -
Bva05g00322 614 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00322 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Bva05g00322 614 Gene3D Transferase(Phosphotransferase) domain 1 110 293 - -
Bva05g00322 614 Coils Coil 560 591 - -
Bva05g00322 614 SMART serkin_6 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00322 614 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 394 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00322 Bva-Chr5 1566221 1570383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00322 17 401 MAP Kinase Kinase Kinase AT3G22420 54.462 1.26e-162 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bva05g00322 Pkinase 8.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00322 K08867 - qsu:112036538 803.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00322 05 1566221 1570383 Bva05g00322 05 1566221 1570383 ECH