Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00303 ATGGCTCTCTCTCCTGGGATATTCCACTATCTCTTCCTCCTCTCATTCTCGTACCTTGCCTTGTTCATCCATGCCAGAATAGATCTCGACCCTTCAGACCTCAGAGCTCTTTCTATTATCCAGAAAGCTTTAGGAGTCAATGGTCAACTCCACCCATGTAACACCAATGGTGTCTTGTGTGAGAGGAGACTCTCAGACAATGAGAGCTATGTTCTCAAAATCACAAGGCTCGACTTGAAATCCCAGCAGCTTAAGGGGATTTTGTCCCCTGTAATTGGGCGCCTCACAGAGCTGAaacatctctctctttcaaacAACCAACTGTTCGACCAAATCCCATCCCAGATAGTTGATTGCCGGAAACTGGAAATTCTGGACCTTCGAAACAACAGTTTCTCTGGCCAAGTCCCTTCTGAATTATCCTCTCTCACTCACCTTCGTGTTCTTGATCTTTCTTCCAACAAATTCTCTGGGAATTTGAATTTCCTGAAGTATTTCCCCAATTTGGAACGTCTCTCTGTTGCCGACAATCTCTTCACAGGGAGAGTTCCAGTATCCATACGTTCATTTCGCAACCTCCGGCATTTCAACTTTTCCGGGAATCAATTTCTTGAAGGTTCTGTGCCAATGACAAACAAACTTGAATACTCAGCATCAGAATCAGAGATCCCAAAACGATACATTCTTACTGAGAGTTCAACTGGAAGAAGAAACAGGGCTCCTGCAGCTGCCCCAAAATCCAGCAAGACTTCTACTGCTGAAGCTCCTGGTCCATCGGGGTCAACCTACAACAATCACAAGTCAAGCAAGAGGAAATTATATGGGTGGATACTTGGATTTGTCGCTGGAGCACTGGCTGGGAGCATTTCTGGGTTCATATTCTCTTTGCTATTCAAGCTGGCCTTAGCTTTGTTcaaaggaagaaggaagagCTCAGGACCTGATATTTATAGTCCTCTTATTAAGAAAGCAGAGGACTTGGCTTTCTTGGAGAGAGAAGACGGGCTGGCTTCATTCGAAATCATAGGAAGAGGTGCAAGCGGAGAAGTTTACAAAGCTGAATTGCCAGGAAGCAACGGCAAAATGATTGCCATTAAGAAGATTATTCAACCTCCAAAAGAAGCAGCAGAATTACTTGCTGAAGAGGAAAGTAAGctattgaacaaaaaaatgcGTCAAATTCGATCAGAGATCAAGACAGTTGGTCAAATTCGACATCGCAATCTCCTGCCCTTGCTTGCTCATGTGTCTAGGCCGGATTGCCACTACCTCGTCTATGAGTTCATGAAGAATGGAAGTTTACAAGATGTGCTGAATAAAGTTCAAGAGGGTACAATGGAGTTGGATTGGTTGTCACGGCACGAGATTGCAGTTGGAGTTGCAGCTGGCCTTGAATACCTTCATGTGAGCCACAGCCCTTGCATAATTCATAGAGATCTTAAGCCAGCAAACATTCTTCTCGATGATAATATGGAAGCTCGTATTGCAGATTTTGGGCTTGCAAAAGCAATGCCAGATGCTAATACACATGTCACTACTTCAAATGTTGCAGGTACAGTGGGGTATATAGCACCAGAATATCACCAAATTCTCAAGTTCACGGATAAATgtgatatttatagttttgggGTTGTACTTGGCATCTTGGTCATAGGAAAGCTTCCATCTGATGACTTTTTCCAGCACACAGAGGAAATGAgtttggttaagtggatgagaAATGTGATGACTTCAGAAGATCCTACGCGAGCAATTGACCCAAAGCTAATGAACAATGGATATGAGGAGCAAATGCTCCTAGTTCTCAAGATCGCCTGCTTTTGCTCTAATGATGATCCAAAAGAGAGGCCTAACAGTAAGGATGTTAGGACTATGTTGACCCAAATCAAGCATTG 1895 0.4174 MALSPGIFHYLFLLSFSYLALFIHARIDLDPSDLRALSIIQKALGVNGQLHPCNTNGVLCERRLSDNESYVLKITRLDLKSQQLKGILSPVIGRLTELKHLSLSNNQLFDQIPSQIVDCRKLEILDLRNNSFSGQVPSELSSLTHLRVLDLSSNKFSGNLNFLKYFPNLERLSVADNLFTGRVPVSIRSFRNLRHFNFSGNQFLEGSVPMTNKLEYSASESEIPKRYILTESSTGRRNRAPAAAPKSSKTSTAEAPGPSGSTYNNHKSSKRKLYGWILGFVAGALAGSISGFIFSLLFKLALALFKGRRKSSGPDIYSPLIKKAEDLAFLEREDGLASFEIIGRGASGEVYKAELPGSNGKMIAIKKIIQPPKEAAELLAEEESKLLNKKMRQIRSEIKTVGQIRHRNLLPLLAHVSRPDCHYLVYEFMKNGSLQDVLNKVQEGTMELDWLSRHEIAVGVAAGLEYLHVSHSPCIIHRDLKPANILLDDNMEARIADFGLAKAMPDANTHVTTSNVAGTVGYIAPEYHQILKFTDKCDIYSFGVVLGILVIGKLPSDDFFQHTEEMSLVKWMRNVMTSEDPTRAIDPKLMNNGYEEQMLLVLKIACFCSNDDPKERPNSKDVRTMLTQIKH 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00303 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Bva05g00303 631 SMART serkin_6 336 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00303 631 SUPERFAMILY Protein kinase-like (PK-like) 326 627 IPR011009 -
Bva05g00303 631 SUPERFAMILY L domain-like 49 206 - -
Bva05g00303 631 MobiDBLite consensus disorder prediction 244 266 - -
Bva05g00303 631 Gene3D Ribonuclease Inhibitor 141 222 IPR032675 -
Bva05g00303 631 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE KINASE 9 631 - -
Bva05g00303 631 MobiDBLite consensus disorder prediction 234 266 - -
Bva05g00303 631 Gene3D Transferase(Phosphotransferase) domain 1 429 631 - -
Bva05g00303 631 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Bva05g00303 631 ProSiteProfiles Protein kinase domain profile. 336 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00303 631 Gene3D Ribonuclease Inhibitor 36 140 IPR032675 -
Bva05g00303 631 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 9 631 - -
Bva05g00303 631 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515
Bva05g00303 631 Pfam Protein kinase domain 339 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00303 631 ProSitePatterns Protein kinases ATP-binding region signature. 342 367 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00303 Bva-Chr5 1482624 1485163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00303 11 631 Receptor kinase-like Gene Family AT2G31880 64.082 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Bva05g00303 Pkinase 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00303 - - qsu:111990511 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00303 05 1482624 1485163 Bva05g00303 05 1482624 1485163 ECH