Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00297 ATGGATGCCAAAAACACCTCAAAAACTGATTTTGCCTGTGTTTCTCCGATCACCTCTGCCGACTTCAAAATCATCCAGGCCTTACCCGAACCCGATGTTTATATACACACGTCCGCCGGCGCACGCATTCCCGCCCACGCTAGTATTCTGGCTTCGGTATCACCGGTTCTGGAGAATATCATAGATCGACCGCGCAAGCACCGCAGCTCTGAGAGAATCATTCAAATCCATGGCGTTCCTTGTCACGCCGTCGCCGCCTTCCTCGGCTTCCTCTACTTCTCCAGATGTACAGAGGAGCAGTTGGAAAAGTATGGGATGCATCTGCTGGCATTGTCTCACGTGTATTTAGTGCCACAGCTGAAGCAGAGATGCATTAAGGGCTTGAGGGAACGATTAACGGTTGAGAATGTTGTGGATGTACTCCAACTGGCAAGGCTCTGCGATGCACCTGATCTTTACATCAAGTGCATGAAGTTACTCACCAACAATTTCAAATCTGTGGAGAAAACAGAGGGCTGGAAATTCTTGCAAAGGCACGATCCCTGGCTTGAGCTCGACATCCTCCGCTTTATGGACGAGGACGAATTGaggaaaaagaaatcaaggaAGCACAGGAAGGAACAGAGCTTGTACTTGGAGCTAAGCGAGGCAATGGAGTGTTTGGAGCACATATGCACGGAAGGGTGCACCGACGTTGGGCCCTACGACATTGAGCTTAACAAGGAGAGGAGACCGTGTACCAAGTTTGCCACGTGTCAAGGTCTTCAGATCTTAATCCGGCATTTCGCGACATGCAACAAGAGGATCGGCGGCGGCTGCTTACGCTGTAAGCGGATGTGGCAGCTGTTTAGACTCCACTCCTCCATATGCCAACATTCCGACACTTGCAAGGTCCCTCTTTGCAGgcaaattcaaatgaaaatacagcaggataaaaagaaagacGATCCAAGATGGAAACTGCTAGCGAGGAAGGTGGCCGCAGCCAGAGCCGTGTCTTCTCTGTCTTTGTCAAAGAGGAAACGAGATGAGGAAATTAGTCTGAATATGAACAAACATGGGATTAGAAGTTTCAATCTACGATG 1085 0.4737 MDAKNTSKTDFACVSPITSADFKIIQALPEPDVYIHTSAGARIPAHASILASVSPVLENIIDRPRKHRSSERIIQIHGVPCHAVAAFLGFLYFSRCTEEQLEKYGMHLLALSHVYLVPQLKQRCIKGLRERLTVENVVDVLQLARLCDAPDLYIKCMKLLTNNFKSVEKTEGWKFLQRHDPWLELDILRFMDEDELRKKKSRKHRKEQSLYLELSEAMECLEHICTEGCTDVGPYDIELNKERRPCTKFATCQGLQILIRHFATCNKRIGGGCLRCKRMWQLFRLHSSICQHSDTCKVPLCRQIQMKIQQDKKKDDPRWKLLARKVAAARAVSSLSLSKRKRDEEISLNMNKHGIRSFNLR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00297 361 Pfam TAZ zinc finger 215 301 IPR000197 -
Bva05g00297 361 Gene3D TAZ domain 205 330 IPR035898 -
Bva05g00297 361 SUPERFAMILY POZ domain 32 162 IPR011333 -
Bva05g00297 361 ProSiteProfiles BTB domain profile. 31 100 IPR000210 GO:0005515
Bva05g00297 361 Gene3D Potassium Channel Kv1.1; Chain A 28 132 IPR011333 -
Bva05g00297 361 SMART BTB_4 31 132 IPR000210 GO:0005515
Bva05g00297 361 Pfam BTB/POZ domain 31 130 IPR000210 GO:0005515
Bva05g00297 361 SMART TAZ_2 208 302 IPR000197 -
Bva05g00297 361 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 18 359 - -
Bva05g00297 361 Gene3D - 133 204 - -
Bva05g00297 361 CDD BACK 133 176 - -
Bva05g00297 361 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 18 359 IPR044513 -
Bva05g00297 361 SUPERFAMILY TAZ domain 206 306 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00297 Bva-Chr5 1460164 1462503 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Bva05g00297 BTB 3.3e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00297 - - cam:101496955 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00297 05 1460164 1462503 Bva06g01448 06 10562266 10564505 BWGD
Bva05g00297 05 1460164 1462503 Bva05g00297 05 1460164 1462503 ECH