Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00292 ATGGCATCAAGTGAAGGGTTTCTGACGGATGAGCAGAGGGAATTGCTTAAACTTGCCAGTCATAATGTTGAGAATTTGTCTTCATCACCAAAATCCCCGACATCCTTTCTTTCTGAACATCATATAAAAGCTCCTGCTGGTGGAAAGGCGCAAACTGCTGGGATTGCTGTGAGGCATGTACGCAGGTCACATTCTGGGAAGTTAGTGCGGGTGAAGAAGGATGGTGCTGGTGGAAAGGGCACTTGGGGAAAATTGCTTGACACTGATGGTGAATCTCATATAGACAGGAATGATCCTAACTATGACAGTGGTGAGGAACCTTATCAGCTGGTTGGTTCCACTGTAACTGATCCCTTAGATGAATTCAAGAAAGCCGTTGTATCCATTATAGAGGAATACTTTAGCACTGGGGATGTTGAATTGGCTGCATCTGACCTGAGAGAACTAGGCTCAAGTGAATATCATCCGTACTTTATCAAGCGACTTGTGTCCATGGCCATGGACAGGCATGATAAGGAGAAGGAAATGGCTTCCGTTCTGCTTTCAGCTTTATATGCTGATGTTATCAGTCCTGCACAGATCAGGGATGGATTTTTTATGCTTATTGAATCTGCCGATGATCTTGCAGTGGACATACTGGATGCAGTTGACATCCTTGCTTTATTCTTGGCTCGTGCTGTTGTGGATGACATCCTTCCTCCAGCCTTCCTTGCCAGAGCAAAGAAGGCACTTCCAGAGTCTTCCAAAGGAGTTCAAGTAATCCAGACTGCTGAGAAGAGTTATCTATCAGCTCCACACCATGCAGAACTTGTGGAGAAGCGGTGGGGTGGTAGCACTCACATCACTGTTGAAgaagtgaaaagaaagattGCTGACTTATTAAGAGAATATGTGGACAGTGGTGACACAATTGAAGCCTGTAGGTGTATAAGGGAGTTGGGGGTTTCATTCTTCCATCATGAGGTTGTGAAAAGGGCTCTGGTGCTTGCTATGGAGATTCGTTCAGCAGAACCCTTAATATTGAAGCTATTGAAAGAAGCTGCTGATGAAGGACTTGTTAGTTCTAGCCAAATTTTGAAAGGGTTTTCTCGATTAGCAGAAGGCCTGGATGATCTTGCTCTTGATATTCCATCAGCTAAAAGCTTGTTTGAGTCTTTGGTCCCCAAGGCAATATCTGAAGGATGGCTTGATGCTTCATTTTTGAAACCCTCCGGTGAGGATGGAGATATACAAGTCGAAGATGAAAGGTTGAGGAGGTACAAAGAAGAGGCTGTAACTATAATTCATGAGTATTTTCTCTCTGATGACATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGTGGCACCTGAGTATAATCCAATATTCTTGAAGAGGCTTATCACTCTTGCCATGGACAGAAAGAACAGGGAAAAGGAAATGGCATCTGTACTGCTCTCTGCTCTTCACATAGAGATCTTCTCAACAGAGGATATAGTTAACGGTTTTGTCATGCTTCTGGAATCTGCAGAAGATACAGCACTGGATATACTAGATGCTTCGAATGAGCTTGCCCTTTTTCTAGCTAGGGCTGTGATTGATGATGTGTTGGCCCCACtgaatttagaagaaattGGCAGCAGATTGCCTCCGAAGTCCAGTGGGAGTGAAACTGTGCGGATGGCTCGTTCACTAATTGCTGCTCGTCATGCTGGTGAGAGGCTCTTGAGATGTTGGGGCGGTGGGACTGGATGGGCGGTGGAGGATGCTAAGGACAAGATCATGAAGCTCCTGGAGGAGTACGAAAGCGGGGGTGTTGTAAGTGAAGCTTGTCAGTGTATTCGTGACCTTGGAATGCCTTTCTTTAACCATGAGGTTGTGAAGAAAGCGTTGGTTATGGCTatggagaagaagaatgatAGGATGCTGGATCTGCTTCAGGAATGCTTTAGTGAAGGTCTTATCACCATCAATCAGATGACTAAAGGTTTCACCCGGATCAAGGACGGTCTCGATGATCTGGCTCTGGATATTCCGAATGCGAAGGAGAAATTTGGCTTCTATGTAGAGCATGCCCAGAGGAAGGGATGGCTTCTTCCATCATTTGATTCGTCTGCCACAGATGCCTA 2108 0.4435 MASSEGFLTDEQRELLKLASHNVENLSSSPKSPTSFLSEHHIKAPAGGKAQTAGIAVRHVRRSHSGKLVRVKKDGAGGKGTWGKLLDTDGESHIDRNDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSIIEEYFSTGDVELAASDLRELGSSEYHPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLIESADDLAVDILDAVDILALFLARAVVDDILPPAFLARAKKALPESSKGVQVIQTAEKSYLSAPHHAELVEKRWGGSTHITVEEVKRKIADLLREYVDSGDTIEACRCIRELGVSFFHHEVVKRALVLAMEIRSAEPLILKLLKEAADEGLVSSSQILKGFSRLAEGLDDLALDIPSAKSLFESLVPKAISEGWLDASFLKPSGEDGDIQVEDERLRRYKEEAVTIIHEYFLSDDIPELIRSLEDLVAPEYNPIFLKRLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKSSGSETVRMARSLIAARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAKEKFGFYVEHAQRKGWLLPSFDSSATDA 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00292 702 SUPERFAMILY ARM repeat 418 575 IPR016024 -
Bva05g00292 702 Gene3D - 411 563 - -
Bva05g00292 702 Gene3D - 114 262 - -
Bva05g00292 702 ProSiteProfiles MI domain profile. 582 701 IPR003891 -
Bva05g00292 702 PANTHER PROGRAMMED CELL DEATH 4 1 694 IPR039778 GO:0045892
Bva05g00292 702 SMART ma3_7 583 692 IPR003891 -
Bva05g00292 702 SMART ma3_7 122 233 IPR003891 -
Bva05g00292 702 SMART ma3_7 420 531 IPR003891 -
Bva05g00292 702 SMART ma3_7 286 397 IPR003891 -
Bva05g00292 702 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Bva05g00292 702 SUPERFAMILY ARM repeat 579 697 IPR016024 -
Bva05g00292 702 Gene3D - 272 403 - -
Bva05g00292 702 Gene3D - 570 699 - -
Bva05g00292 702 PANTHER PROGRAMMED CELL DEATH PROTEIN 4-LIKE 1 694 - -
Bva05g00292 702 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Bva05g00292 702 Pfam MA3 domain 584 691 IPR003891 -
Bva05g00292 702 Pfam MA3 domain 122 233 IPR003891 -
Bva05g00292 702 Pfam MA3 domain 286 397 IPR003891 -
Bva05g00292 702 Pfam MA3 domain 421 530 IPR003891 -
Bva05g00292 702 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Bva05g00292 702 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Bva05g00292 702 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00292 Bva-Chr5 1430951 1435347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00292 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 33.000 7.76e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00292 - - gmx:100809081 1254.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00292 05 1430951 1435347 Bva05g00292 05 1430951 1435347 ECH