Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00291 ATGGCAGGTTCTGGAGCTCTGACAGCAGAGCCAAACCCAGAGGTACTTTCATGGCTAAAATCTCTTCCTTCGGCTCCAGAGTACAGGCCAACTTTGGCTGAGTTCCAGGATCCAATTTCATACATTTTTAAGATCGAGAAAGAGGCTTCAAAGTATGGAATCTGCAAAATCGTTCCCCCTGTGCCTCCTTCTCCGAAAAAGACAGCAATTGCGAATTTTAATCGCTCTTTGGCGGCTCGAGCTACTTCCCCTGACTCTTCCAATTCGAAATCTCAGCCTACATTTACCACAAGGCAGCAACAGATCGGGTTCTGCCCTCGGAAACCAAGGCCTGTGCAGCGGCCTGTGTGGCGGAGTGGTGAATATTACACTTTTCAGGAATTCGAAACCAAGGCCAAGGCTTTTGAGAAGAATTATCTGAAGAAATGTATCAAAAAAGGGGGTCTTTCGGCTTTAGAATTAGAAACGCTTTATTGGAAGGCCACAGTGGACAAACCCTTTTCAGTAGAGTACGCGAACGACATGCCTGGCTCTGCTTTTGTTCCCGTCAATGGGAAAAAATGTAGAGAGCCAGGGGAAGGTGTGACTTTAGGTGAGACAGCATGGAACATGAGGTGGGTGTCAAGGGCAAATGGTTCTCTGCTGAGGTTCATGAAGGAGGAGATTCCAGGTGTTACGTCCCCGATGGTCTATGTAGCCATGTTGTTCAGCTGGTTTGCTTGGCATGTGGAGGATCATGACTTGCATAGTTTGAATTACCTGCATATGGGGGCAGGGAAGACATGGTATGGCGTGCCAAGGGATGCCGCTGTGGCATTCGAGGAAGTGATCAGAGTTCATGGTTATGGAGGAGAAATAAACCCACTTGTTACTTTCGCGGTTCTTGGTGAGAAAAACACTGTGATGTCACCTGAAGTGTTTATTAGCGCTGGGGTTCCATGCTGCAGGTTAGTGCAAAATGCTGGGGAATTCGTTGTCACATTTCCAAGAGCGTATCACACAGGCTTTAGTCATGGATTTAATTGTGCAGAGGCAGCTAATATTGCTACACCTGAATGGTTGAGGGTCGCTAAAGATGCTGCTATTCGGAGGGCTTCAATAAATTACCCCCCCATGGTTTCACATTTCCAGTTACTTTATGACCTTGCCCTAGCATTGTGTTCTAGGTTTAATCCCGGGGGCATCTGCTCTGAACCTCGGAGTTCTCGACTTAAAGATAAGAGGAAAGTTGAAGGGGAAACtgtaattaaagaattatttgttCAGGATGTTATACAGAATAATGATCTGCTTCATTTACTTGGGAAAGAATCATCTATAGTGCTTCTTCCTCGTAGCTCTTCAGACATTTCTGTTTGTTCAAAATTACGTGTTGGATCTCAACAACTAAAGGTGACCCCTGGATTTACCCTCAATGCATGCACTTCTGAGGGAAtaaattcttcaaagggttttaTTTCTGATGACTTGATGTTCAACAGAAACCATGGAATCAAACAAGTGAAAGGTTTCTATTCAGTGAAAGAAAAGTTTGCTTCCCTGTGTGAAAGAAACAGGATTTCCTTGTTAACACTAAACGATAACATATGCACTCCAAGTTCCAAGACGCTGCAAACAGACACtaaacaagaaacaaatgaaaatgatggcTTGTCAGATCAGAGACTATTTTCATGTGTCACTTGTGGAATACTAAGCTTTGCCTGTGTTGCTATTGTACAGCCTAGAGAACCAGCAGCTAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTGACTAGCAATAAATTTTCTGTTGCCCATGGAAATAAAACTGTGTCTGAGCAGAACACACATACAGCATTGATAAGGAAGAATGCCCCGGCTAGTTTATATGATGTTCCTATTCAATCGGTTGAATACCAGAGAAGGATTGCAGATCAATATTATGATGAGGCTGTAAACACTGACAGACTAAATGACAGTTCTGCTCTTGGCTTATTGGCGTCAGCTTATGGGAATCCTTCTGACTCAGAGGAAGATCGCGCCAACCCTGATAATACGGTTGACGGTGATGAATCAAATGTGATAAACCAGTTGTCAGGAAATAGATGTCAGAAGGAAAGATCTCGTTTGCATGGTCAAGTTCAACGTGAAGATGGTATTCTTTCAAAGAATCTTGACAGTTATGAGGATTATTCACATGAAAAAGCTAAATGTGATAATAGGGTTCATCAGAATTTTGACTACTCGATTGAATCGGAGGATTATAATATCACTTCAATAAAACCAAGTGGTTCAGCCTTGAATAAATCCCCAGATGTTCGTCATGGTGAAACATCAATGTTTGGCAATGCTATAGTTCCCATTCCCATTGATGATAAAACTGCTTCATTAGTGCCAAAATCTGACGAAGACTCATCTAGAATGCATGTCTTTTGTCTAGAGCACGCTGCAGAGGTGGAGCGGCAACTTCGCCCAATAGGAGGAGTGCACATATTGCTCCTATGCCATCCAGATTATCCCAAGATAGAGGCTGAAGCAAAGTTTGTGGCAGAAGAACTGGGAAACAGTTACATGTGGAAGAACATTGTGTATAGACACGCCACCAAAGAGGATGAGGAGAGAATTCAGTCCGCTCTGGATAGTGAGGAAGCTATTCCTGGGAATGGAGACTGGGCTGTAAAGCTTGGAATCAATCTCTTTTACAGTGCAAACCTTAGCCGTTCTCCTCTATATAGTAAGCAGATGCCTTACAATTCTGTTCTATATTATGCATTTGGTCGTAGTTCTCCAGCAAGCACAACCACAGAGCCAAAGGTCTACAGTAGAAGATCCAGCAAGCAGAAAAAGGTGGTAGCTGGGAAATGGTGTGGCAAAGTTTGGATGTCCAATCAAGTTCATCCCCTTCTTGCAAAAGGAGATTCTGAAGACGATGATGATGAGAGAAGCTTACATGGTTGGACGTTACCtgataagaaaattgagagaTCTGAAAGTGCTCGCAAAAATGATGTTGCAAATAGAAAATCTAGtacgaaaaggaaaatgattaCAAAGAGCGGGGGAACCAGGAAAACCAGTCAGGTTGATAGAGAAGGTACGGTTTCAGATCATTCAATTGAAGATAAATTCATCAAACAGCAAAGGGGGGTCCTTAGAAGAAGTAAGCAACCCAAACATACTGAGGGAGGAGAGGCCCCTTCTGAAGGGGATTATTCTCCTCTTTGGCGTCATAGAAAACCTGTAAGCAAGCAAACAAAATGCATCGACAGTGATGCAGTTTCAGATGATTCCCTGGATGAAAATTCTCGTTTGAAGCATAGGAGGAATGCTAATGTcaaggaaacaaaatttattgacaACAATGTGGTTTCAGATGATGAAATAGAATATGATTCTGATTGGCAACGGAGGGAGGCATTTAGTAGCGAGCAAGTCAATGATGCAGATGCAATTTCAGAGGATTCACTGGATGGTGTTTCTCTTCAGCAACATAGGAGGACTTCTAAAAGCAAACGAGGCAAATATCTTGctgaagaatatataatttctgaTGAACAAACGGAGGACCATTTTCAGAAGCAGCATAAGAAGATTCCTAGAAGCAGGCAAGCCAAATACCTTATTGGAGAAGATATGATGATATCAGATGACGAACTAGAGTATCCCAGGCAGAAGCAGCAACAAAGGATTCGTAAAAGCAGGCAAGCCAAATACACTGCCGGAGAAGATATTACATCTGATGACCAACTGGATGACCGTCCAATCACGTATCAAAGAAGGGTCCCCAGAAGCAAGCAGGCCAAGTATATCGCTCAAGATAATATACCTGATGAACAACTCGAGGATCATTCTCTTGtgtatcaaagaaaaaacctCAAGAGCAGGCAATCCAAATACTTTGTTGGGGGGAATGTAATGTCTGATTACCAACTGGAGGATCACTTCCAGAAGCAGCCAAGGAGTGCTACTAGAAGCAGGGAAAAGAAATGCTTTGATAGAGACGATATGGTTATGGATGAATGCACTGAAAATAATTCTCATCTTCTCGTGGGAATTCCTAGAAGAAAGCGAGCCAAACGGATGGATGCAAATAGCGTGAATTCAGATGACGAAATGGAGGATGATTCTCATCAGCAGCACAAGAGGGTTCTCCGAAGCAAGCAATCTAAATCAGAGACGCTTCGTCAGATGAAACAATCTAACCATCGCCAAGTGAAAAAACAGACATCCCTGCCTATAAAGCGAGGTGCTCGGCTGCTAATGAAACCAAAGACTTCTCAGCAAATGAAGCAACCTCCTCGTGTGCGAACCAATCAATCTGTGAACTCTAGACAGTATCATTTATCTGATGACGACGAAGAGGGTGGACCTAGCACACGCCTTAGGAAGCGAACCCCAAAAGTTGAGAAGGAGCCCGaagcaaaatcaaaagagaagcaaaccaagaaaaaagggaagaatGCTGCTTCATCTGGCTCTGGTGAGGCCAAAATGAACGATGAGGAAGCAGAATATCAGTGTGACATTGAGGGTTGCACTATGAGTTTTGGCTCAAAACAGGAGCTTGTGACGCataagagaaatatatgtCCGGTAAAGGGGTGCGGGAAGAAGTTTTTCTCACACAAATATCTGGTTCAGCACCGTCGAGTTCACATGGATGACCGTCCACTGAAGTGTCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCGTGGGCTCGTACTGAACATATTAGAGTTCACACCGGTGCTCGTCCATACGTTTGTGCCGAGCCAGGCTGTGGCCAAACATTCAGATTTGTCTCCGATTTCAGTCGGCATAAGCGAAAGACCGGTCATTCAGCAAAGAAGAGTCGTTA 4871 0.4209 MAGSGALTAEPNPEVLSWLKSLPSAPEYRPTLAEFQDPISYIFKIEKEASKYGICKIVPPVPPSPKKTAIANFNRSLAARATSPDSSNSKSQPTFTTRQQQIGFCPRKPRPVQRPVWRSGEYYTFQEFETKAKAFEKNYLKKCIKKGGLSALELETLYWKATVDKPFSVEYANDMPGSAFVPVNGKKCREPGEGVTLGETAWNMRWVSRANGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVIRVHGYGGEINPLVTFAVLGEKNTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRFNPGGICSEPRSSRLKDKRKVEGETVIKELFVQDVIQNNDLLHLLGKESSIVLLPRSSSDISVCSKLRVGSQQLKVTPGFTLNACTSEGINSSKGFISDDLMFNRNHGIKQVKGFYSVKEKFASLCERNRISLLTLNDNICTPSSKTLQTDTKQETNENDGLSDQRLFSCVTCGILSFACVAIVQPREPAARYLMSADCSFFNDWVVGSGVTSNKFSVAHGNKTVSEQNTHTALIRKNAPASLYDVPIQSVEYQRRIADQYYDEAVNTDRLNDSSALGLLASAYGNPSDSEEDRANPDNTVDGDESNVINQLSGNRCQKERSRLHGQVQREDGILSKNLDSYEDYSHEKAKCDNRVHQNFDYSIESEDYNITSIKPSGSALNKSPDVRHGETSMFGNAIVPIPIDDKTASLVPKSDEDSSRMHVFCLEHAAEVERQLRPIGGVHILLLCHPDYPKIEAEAKFVAEELGNSYMWKNIVYRHATKEDEERIQSALDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVLYYAFGRSSPASTTTEPKVYSRRSSKQKKVVAGKWCGKVWMSNQVHPLLAKGDSEDDDDERSLHGWTLPDKKIERSESARKNDVANRKSSTKRKMITKSGGTRKTSQVDREGTVSDHSIEDKFIKQQRGVLRRSKQPKHTEGGEAPSEGDYSPLWRHRKPVSKQTKCIDSDAVSDDSLDENSRLKHRRNANVKETKFIDNNVVSDDEIEYDSDWQRREAFSSEQVNDADAISEDSLDGVSLQQHRRTSKSKRGKYLAEEYIISDEQTEDHFQKQHKKIPRSRQAKYLIGEDMMISDDELEYPRQKQQQRIRKSRQAKYTAGEDITSDDQLDDRPITYQRRVPRSKQAKYIAQDNIPDEQLEDHSLVYQRKNLKSRQSKYFVGGNVMSDYQLEDHFQKQPRSATRSREKKCFDRDDMVMDECTENNSHLLVGIPRRKRAKRMDANSVNSDDEMEDDSHQQHKRVLRSKQSKSETLRQMKQSNHRQVKKQTSLPIKRGARLLMKPKTSQQMKQPPRVRTNQSVNSRQYHLSDDDEEGGPSTRLRKRTPKVEKEPEAKSKEKQTKKKGKNAASSGSGEAKMNDEEAEYQCDIEGCTMSFGSKQELVTHKRNICPVKGCGKKFFSHKYLVQHRRVHMDDRPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSAKKSR 1623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1221 1256 - -
Bva05g00291 1623 ProSiteProfiles Zinc finger C2H2 type domain profile. 1531 1560 IPR013087 -
Bva05g00291 1623 ProSitePatterns Zinc finger C2H2 type domain signature. 1533 1555 IPR013087 -
Bva05g00291 1623 Gene3D Classic Zinc Finger 1529 1615 - -
Bva05g00291 1623 ProSiteProfiles JmjC domain profile. 196 365 IPR003347 -
Bva05g00291 1623 SUPERFAMILY Clavaminate synthase-like 210 379 - -
Bva05g00291 1623 SUPERFAMILY beta-beta-alpha zinc fingers 1547 1589 IPR036236 -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1144 1175 - -
Bva05g00291 1623 SMART JmjN_1 24 65 IPR003349 -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 995 1090 - -
Bva05g00291 1623 SMART cupin_9 196 365 IPR003347 -
Bva05g00291 1623 ProSitePatterns Zinc finger C2H2 type domain signature. 1593 1617 IPR013087 -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 671 717 - -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 690 706 - -
Bva05g00291 1623 ProSiteProfiles Zinc finger C2H2 type domain profile. 1561 1590 IPR013087 -
Bva05g00291 1623 SMART c2h2final6 1508 1530 IPR013087 -
Bva05g00291 1623 SMART c2h2final6 1561 1585 IPR013087 -
Bva05g00291 1623 SMART c2h2final6 1591 1617 IPR013087 -
Bva05g00291 1623 SMART c2h2final6 1531 1555 IPR013087 -
Bva05g00291 1623 Gene3D Cupin 18 369 - -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 79 102 - -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1427 1448 - -
Bva05g00291 1623 SUPERFAMILY beta-beta-alpha zinc fingers 1579 1613 IPR036236 -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1355 1503 - -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1358 1402 - -
Bva05g00291 1623 Pfam jmjN domain 26 59 IPR003349 -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1449 1488 - -
Bva05g00291 1623 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Bva05g00291 1623 ProSiteProfiles Zinc finger C2H2 type domain profile. 1591 1622 IPR013087 -
Bva05g00291 1623 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1614 - -
Bva05g00291 1623 ProSitePatterns Zinc finger C2H2 type domain signature. 1563 1585 IPR013087 -
Bva05g00291 1623 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 995 1013 - -
Bva05g00291 1623 MobiDBLite consensus disorder prediction 1032 1090 - -
Bva05g00291 1623 PANTHER LYSINE-SPECIFIC DEMETHYLASE REF6 8 1614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00291 Bva-Chr5 1419474 1427345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00291 1264 1622 C2H2 Transcription Factor Family AT3G48430 40.777 9.92e-72 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva05g00291 JmjC 3e-36 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00291 - - gmx:100775813 2003.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00291 05 1419474 1427345 Bva08g00168 08 826840 828366 BWGD
Bva06g01456 06 10611005 10619102 Bva05g00291 05 1419474 1427345 BWGD
Bva05g00291 05 1419474 1427345 Bva05g00291 05 1419474 1427345 ECH