Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00287 ATGAAGAACATCTTTGTAATTGCTCCAATTGTCTTctccttgttttgttttcaagaGATCATCCACGTTTCTTCGTCGTCGCCTCTCTTGCATGGAAACCAGGTTCATGAAGAATCTGCTGGTGGAAGACATCTTAAACAGGAACAAGAGCATGCCAATGAAGTACATTGCTCTAGAGAAAGAAGTAGGGTAGCCTGGAAAATAATTGAGGAGTATTTGATGCCTTTTTTGGAACGAGAAAACTATCAACTCTCAAGCAAGTGCAGACTCCATCCTGACAATGATATATTCAGGGATCAGGAAGAACACAAAATTCACATAGATATAAATGAATGGCGGTGTGGATATTGTAAGAAAAGCTTCCGTGCTGAAAAATTTCTTGACCAGCATTTTGATAACAGACACTACAATCTTCTAAATGTAAGTCATAGTAAGTGCTTGGCTGATTTATGTGGGGCATTGCATTGTGATGCTATGATGAATTCCCAGTCCTCTAAAACCAAGTGTAATCCTGCAGCTGCTGCAAGAAATCGTCACCTATGTGAGAGTCTTGCTGACAGTTGTTTTCCTATAAGTGATGGTCCCTCAGCAAGTCGGCTTCATGAATTGTTTCTGCACCAATTTTGTGATTCTCACACCTGCTCGGGAAAACAGAAACCCTTCTCTAGAGGAGGCAAGAAGCAAGGAAGTTTGTTCTACCTGGCTGCTGGAGCATTAACCTTGGTGCTACTTCCCGTGTTCtatctttttgtttacttGGTCCAAAGAGACATGAATGGCCAGACTCAGGAGCTTAGGCGCATCTCAAAAGTGGGACGTAAATCAAAACCGTCTTG 836 0.4055 MKNIFVIAPIVFSLFCFQEIIHVSSSSPLLHGNQVHEESAGGRHLKQEQEHANEVHCSRERSRVAWKIIEEYLMPFLERENYQLSSKCRLHPDNDIFRDQEEHKIHIDINEWRCGYCKKSFRAEKFLDQHFDNRHYNLLNVSHSKCLADLCGALHCDAMMNSQSSKTKCNPAAAARNRHLCESLADSCFPISDGPSASRLHELFLHQFCDSHTCSGKQKPFSRGGKKQGSLFYLAAGALTLVLLPVFYLFVYLVQRDMNGQTQELRRISKVGRKSKPS 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00287 278 ProSitePatterns Zinc finger C2H2 type domain signature. 114 135 IPR013087 -
Bva05g00287 278 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 11 278 - -
Bva05g00287 278 PANTHER ZINC FINGER PROTEIN-RELATED 11 278 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00287 33 278 C2H2 Transcription Factor Family AT5G63280 64.113 2.17e-115 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva05g00287 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00287 - - gmx:100780668 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00287 05 1396172 1400532 Bva05g00287 05 1396172 1400532 ECH