Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00269 atggCTAGAACAAGTATTTTAGACTCACCTAAGCCTAAACGCGTAACGGGTCAACGAAGAAAGGCAGCTGGTATCAATCGTGTTTCTTCCTGTGATTCTAATCGCCGCTGGTTTTTCATCCTTTCCTTCTCCGTCGGTGTCTGTGTCGCCGGGCGATACAGGGTTTTGAGAAGGGAGTCTCACAAATATAGCTCCGGTAAGGAATTTGATCACCATGTTACAGATAAGAACGGGCATCTATCTTCATTTGCCCAGAATTCATATTCTGGACGAAGTGGGTTTtatggaagaaaagaagagagggaGCAAGGAGAAATCTATTCAGAACATGATGCTTTGGCGCCGccagagaagagaaggaagtTTTCTCCAATTGTATggagaaaacagaaagaagtAATATCTTCTAAAAACAGTATCGGACAGGTTACTTCCCTTTCTCCTACTTATCCATCTCTTCCAGGCACTAAGGAAGCCAATCGTGTGTTGAATGGGGATGTTTCAATCCCCAAGTCTCCTACTGATTTGTCTTGTGCGATGTCTCCAGAACATTCAAGCACTGGTAATCAAGATGTCAATCAGTTTGGAGAAGATTGTGTGCAAGGATGGAACATTTCAATGTCCAGGTGGGCCTGTGATGGTTGTTCACCAAAGGATGCATCTGATGACGAATTCTTACACGACAAAGAGAGCTCAAGCCCTGAAAGTGGTGAATTCCGAAGAGAAAGTTCATATCGCAAAACAACTAGATCATCAGTAAGCAGTGGAGGAAGTCTTCATTCGTGCCTATCAAGTGAAGATGAAAAGGGATTTTCTGCTGTTGACTCTATGGACTCAGATGAGGAACATGGTGAAACTGCTTATCATAGTAACCAATCATCAGAATCTGATGATAGTGGTGGTTTAATAAAGgtggaaagaaagataaatatggtTCAGAGTTGCAGAAGTATATTCGAATTTGaaatgattaagaaaataaatgaaggaactTATGGTGTAGTCTATAAAGCTAGGGATAAAAAGTCAGGTGAAATAGTAGCATTAAAGAAGGTGAAGATGAACATAGATAGGGATGGCTTTCCATTGTCGTCTTTGAGGGAAATAAACATTCTCTTGTCTTTTGATCATCCTTCCATTGTGGATGTTAAAGAGGTAgttgttgatgattttgatgGTGTTTTCATGGTAATGGAGTACATGGAATATGACCTCAAGGTGTTGATGGAGGAAATGAAGCAGCCCTTTAGTGTAGGGGAAGTAAAATCCTTGATGTGGAAGCTCCTCAAGGgtgttaaatatatacatgatAACTGGGTCATTCACCGAGACTTGAAGACATCAAATATACTTCTAAACAAGGACGGTGAGTTGAAAATATGTGACTTTGGATTATCTCGCCAGTATGCAAGTCCACTGAAGCCATATACTCCTGTTGTGGTTACTCTATGGTACAGGGCGCCTGAGCTTTTATTAGGTGTTAAAGAGTACTCGACAGCTCTTGATATGTGGTCCGTGGGTTGCATAATGGCTGAATTAATTGTGAAGGAGCCTCTGTTCAAGGGAAAAACTGAAGTTGAACAGCTTGCTAAGATTTTTCGAATCCTAGGCACACCGGATGAGATGATGTGGCCTGGATTATCCAAATTACGTGGATCAAAAGCTAATTTTGTTAAGCAACCGTATAGTATGTTACGAAAGAAGTTTCCAGCTACATCTTTTACGGGTTCACCAGTTCTCTCTGAATTGGGATTTGACTTGTTAAACAAACTTCTGACTTATGACCCTGAGAAGAGGATAACTGCTGAGGATGCTCTCCTCCATGATTGGTTCCGTGAAGCTCCTCTTCCCAAAAATGATTTCAGACCTGCTTTTCCTTCTTGCCGTGGTTA 1892 0.3853 MARTSILDSPKPKRVTGQRRKAAGINRVSSCDSNRRWFFILSFSVGVCVAGRYRVLRRESHKYSSGKEFDHHVTDKNGHLSSFAQNSYSGRSGFYGRKEEREQGEIYSEHDALAPPEKRRKFSPIVWRKQKEVISSKNSIGQVTSLSPTYPSLPGTKEANRVLNGDVSIPKSPTDLSCAMSPEHSSTGNQDVNQFGEDCVQGWNISMSRWACDGCSPKDASDDEFLHDKESSSPESGEFRRESSYRKTTRSSVSSGGSLHSCLSSEDEKGFSAVDSMDSDEEHGETAYHSNQSSESDDSGGLIKVERKINMVQSCRSIFEFEMIKKINEGTYGVVYKARDKKSGEIVALKKVKMNIDRDGFPLSSLREINILLSFDHPSIVDVKEVVVDDFDGVFMVMEYMEYDLKVLMEEMKQPFSVGEVKSLMWKLLKGVKYIHDNWVIHRDLKTSNILLNKDGELKICDFGLSRQYASPLKPYTPVVVTLWYRAPELLLGVKEYSTALDMWSVGCIMAELIVKEPLFKGKTEVEQLAKIFRILGTPDEMMWPGLSKLRGSKANFVKQPYSMLRKKFPATSFTGSPVLSELGFDLLNKLLTYDPEKRITAEDALLHDWFREAPLPKNDFRPAFPSCRG 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00269 630 SUPERFAMILY Protein kinase-like (PK-like) 315 617 IPR011009 -
Bva05g00269 630 MobiDBLite consensus disorder prediction 218 247 - -
Bva05g00269 630 MobiDBLite consensus disorder prediction 173 192 - -
Bva05g00269 630 Pfam Protein kinase domain 321 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00269 630 PANTHER CYCLIN-DEPENDENT KINASE 189 627 - -
Bva05g00269 630 SMART serkin_6 321 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00269 630 CDD STKc_CDC2L1 315 611 IPR045267 GO:0004674|GO:0005524|GO:0006468
Bva05g00269 630 MobiDBLite consensus disorder prediction 218 300 - -
Bva05g00269 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 440 452 IPR008271 GO:0004672|GO:0006468
Bva05g00269 630 MobiDBLite consensus disorder prediction 248 262 - -
Bva05g00269 630 MobiDBLite consensus disorder prediction 1 21 - -
Bva05g00269 630 Gene3D Transferase(Phosphotransferase) domain 1 403 621 - -
Bva05g00269 630 ProSiteProfiles Protein kinase domain profile. 321 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00269 630 MobiDBLite consensus disorder prediction 271 288 - -
Bva05g00269 630 Gene3D Phosphorylase Kinase; domain 1 304 402 - -
Bva05g00269 630 PANTHER CELL DIVISION PROTEIN KINASE 189 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00269 Bva-Chr5 1319452 1324573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00269 310 615 Core Cell Cycle Gene Families AT1G20930 45.426 7.37e-81 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Bva05g00269 Pkinase 2.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00269 K08818 - gmx:100814438 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00269 05 1319452 1324573 Bva05g00269 05 1319452 1324573 ECH