Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00268 ATGGCGAACGATTACCGAACAGAGACCAACAACACGATCGATCCAAATAGCGGCTTTTGCCCACATACTAAAATCTTCCATAGCCTCCGCCCACCGGTCCCTCTGCCTCCTCACACTCAACCGCTAAACATCGTTGACTatactttctctcttctccgtACCACTACTTCCGCCTCGGCCACCACTGTTCTCATCGACGCCTCCACTGACCGCCACGTTTCCTACTCTCTATTCCTTCAACAAATCAACAACCTTGCTTCCTCCCTCAAATCTCTAACCCCTCTTTCCAAGGGCGACGTTGCCTTCATTCTCGCCCCTCCTTCTCTTCATATGCCTGTTCTCtatttctcccttctttcctTGGGAGTCATCATCTCTCCGGCCAACCCAATTGGTTCTGAATCGGAGGTCACTCACCAGGTTGAACTCAGCAAACCCGTTATTGCGTTTGCTACCTCTGCTACTGCCAACAAAATCCCCAAGCTTCAATTCGGCACCATACTCATCGACTCGCCTCAGTTCCTGTCCATGATCAATGGCACGGGTGCAAGTGCTAGCAATGGTGTTGCAAGGGTTGAAACGAGTCAATCTGACTTGGCAGCGATCCTCTACTCGTCGGGAACTACTGGGCGAGTCAAGGGTGTATTGTTGACTCAACGCAATTTAATCGCATTAATTGCGGGTTTTTATCACCTGAGGCATATGGTCGATGTTCCGGAAAATGAATCACATCCGGTATCCTTGTTCACACTGCCACTCTTCCATGTGTTTGGGTTTTTCATGCTAATTAGGGCCATATCGATGGGGGAGACATTGGTTTTGATGCAAAGGTTCGACTTTGAAGGTATGCTGAAGGCCGTGGAGAGGTATAAGATAACTTACATGCCAGTGTCACCACCGCTTGTGGTGGCGCTCTCTAAGTCGGATTTGGTGAACAAGTATGACCTCAGCTCGCTCCATTTGCTTGGGTGCGGTGGTGCGCCGCTTGGTAAGGAGGTGGCCGAGAGTTTCAATGCGAGATTCCCCAATGTGGAAATCGTGCAGGGATATGGCTTGACTGAGAGTGGTGGAGGGGCAACGAGAATGATAGGGTCTGAGGAGGCCAAACGACATGGTTCTGTAGGTCGATTAGCAGAAAATATGGAAGCCAAGATTGTCGATCCTTCAAGTGGGGAAGCATTACCTCCTGGCCAGAGAGGAGAGCTGTGGTTACGAGGTCCTACAATCATGAAAGGCTATATAGCTGATGACAAGGCAACTGCTGAGACTTTGGATTCAGAGGGATGGCTGAAGACTGGAGATCTTTGTTATTTCGATTCTGACGGTTTCTTATACATTGTAGACAGGCTTAAGGAACTGATAAAATACAAAGCATATCAGGTTCCTCCAGCTGAGTTGGAACATGTACTTCATTCCATTCCTGAAATTGCCGATGCTGCTGTTGTTCCGTACCCTGACGAAGTTGCTGGGCAGATTCCTATGGCCTTTGTGGTGAGAAAGCCTGGAAGCAATATCACTGCAGCTCAAGTCATGGATTTTGTGGCAAAGCAGGTTGCACCATACAAGAAAATACGGCGTGTTGCTTTTGTTAACTCCATCCCAAAAAATCCCGCTGGCAAAATTTTGAGAAGAGAATTGGTTAACTATGCTCTGTCTAGTGGTGCATCCAAAttgtg 1676 0.472 MANDYRTETNNTIDPNSGFCPHTKIFHSLRPPVPLPPHTQPLNIVDYTFSLLRTTTSASATTVLIDASTDRHVSYSLFLQQINNLASSLKSLTPLSKGDVAFILAPPSLHMPVLYFSLLSLGVIISPANPIGSESEVTHQVELSKPVIAFATSATANKIPKLQFGTILIDSPQFLSMINGTGASASNGVARVETSQSDLAAILYSSGTTGRVKGVLLTQRNLIALIAGFYHLRHMVDVPENESHPVSLFTLPLFHVFGFFMLIRAISMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLVVALSKSDLVNKYDLSSLHLLGCGGAPLGKEVAESFNARFPNVEIVQGYGLTESGGGATRMIGSEEAKRHGSVGRLAENMEAKIVDPSSGEALPPGQRGELWLRGPTIMKGYIADDKATAETLDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHVLHSIPEIADAAVVPYPDEVAGQIPMAFVVRKPGSNITAAQVMDFVAKQVAPYKKIRRVAFVNSIPKNPAGKILRRELVNYALSSGASKL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00268 558 Gene3D - 25 451 IPR042099 -
Bva05g00268 558 Gene3D - 452 552 IPR045851 -
Bva05g00268 558 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 26 547 - -
Bva05g00268 558 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Bva05g00268 558 SUPERFAMILY Acetyl-CoA synthetase-like 41 552 - -
Bva05g00268 558 Pfam AMP-binding enzyme C-terminal domain 465 540 IPR025110 -
Bva05g00268 558 CDD 4CL 64 546 - -
Bva05g00268 558 Pfam AMP-binding enzyme 61 456 IPR000873 -
Bva05g00268 558 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 26 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00268 Bva-Chr5 1315563 1319137 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00268 7 558 Monolignol Biosynthesis Gene Families AT5G63380 62.589 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00268 K01904 - gmx:100777435 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00268 05 1315563 1319137 Bva05g00268 05 1315563 1319137 ECH