Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00263 ATGGTTGCTTGTAGTTATCTTTCATTGTGTCCGTACAACCTCTGTTGCGGTCCTAATCTAAGAAGGCATTCCATTTTGTGCTCGGTTCGCTCTTCCGCGGTTATTgCTACTGATGGGTCGAAAGCACCTCGCAAAAGATCAAGAAGAGCAGAAGGTCCCAAAAAAAGCATGGAAGACTCTGTTCAACGCAGGATGGAACAATTTTATGAAGGCTCTGATGGACCCCCCCTCCGTGTTCTTCCTATTGGTGGTCTGGGTGAAATTGGGATGAATTGCATGCTTGTGGGGAACCATGACCGCTACATACTCATTGATGCTGGCGTCATGTTTCCAGACTATGATGAGCTAGGTGTCCAAAAGATTATACCTGATACTacatttataagaaaatggaGGCACAAAATTGAAGCAGTTGTTATAACACATGGTCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATCCCTGCATTGGATTCCCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAAAAAGCGTCTAAAAGAGCatggtatttttttatcatcaagactaaaaatatttagagcAAGGAAGAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCAATCAGGGTGACCCATTCTATTCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATCCTTCACACAGGGGATTGGAAGATTGATGAGTCGCCATTAGATGGGAAAGTCTTTGACCGTCAAGCTTTAGAGGAACTTTCTAAAGAAGGAGTAACATTGATGATGAGTGATTCAACAAATATACTCTCACCAGGAAGGACAACCAGTGAATCTGTCGTGGCAGATGCATTGTTGAGGCATATTTCAGCTGCTAAAGGAAGAATCATCACGACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAGGCTGCTGCTGATTTAACTGGTAGAAAGTTGGTATTTGTGGGTATGTCTCTAAGGACATATCTAGATGCAGCATGGAAGGATGGAAAAGCACCATTTGATCCATCCACTCTGgTGAAAGCAGAAGACATTGATGGTTATGCTCCAAAGGACCTGATAATTGTAACCACTGGTTCTCAAGCAGAACCACGTGCCGCCTTGAATATTGCATCATATGGAAGTAGTCATTCTTTCAAACTGACCATGGAAGATGTTATCTTGTATTCAGCAAAGGTTATCCCTGGTAATGAGTCTCGCGTGATGAAAATGCTAAACCGCATATCAGAGATTGGATCAACAGTAATTATGGGGAAGAATGAAGGGTTACACACCTCTGGTCATGGGTATCGTGGAGAAttgGAGGAATTACTAAGAATAGTGAAGCCACAACATTTCCTTCCCATACATGGAGAACTGTTGTTCCTGAAGGAGCATGAATTACTTGGGAAATCAACCGGCATTCGACATACTGCTGTTATTAAAAACGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTGCTTTCTAATGGTTTCGTTTCCCTTGGAAAAGAGAATTTGCAGTTGAAGTATAGTGATGGGGACAAGGCATTTGGTACATCAAGTGAACTGTTTATAGATGAAAGATTGAGAATTGCGTTAGATGGCATTATTGTGGTCAGCATGGAAATATACCGCCCTCAAAAGTTAGACAATCTCGATGAAAATACCTTAAAAGGCAAGATAAGAATTACGACAAGATGCCTGTGGCTTGACAAAGGGAAGCTGTTGGATGCACTTCATAAAGCTGCTCATGCTGCGCTTTCAAGCTGCCCTATAAACTGTCCATTGGCCCACATGGAAAGAACTGTGTCTGAGGTATTGAGGAAGATGGTGAGGAAGTACAGTGGCAAACGACCCGAAGTTATTGCCATTGCCACAGAAAACCCTGCAGCCGTTCTTGCTGATGAAGTTAACACAAAGCTGTCTGGCAAATCCAATGTTGGACCTGGGATATCATCATTGAGAAAATTAGTGGATGGACATATAAAGGAAAATCAGTCCAAGAAAACGCAAGTAAAGGGAGATGATAGCATTGATCCTGAAGGTCCTGAGGAAAACACCGCTACATCAAGTAGAGCTGTCAATAATTCAGATGAATTTCGGAAATCATTCATTAAATCTGATAATGGTTCTGTTCCATTGAAGGAACAGAGCTCCCAGTTGAAGAAGGATGGTTCTGAGGACACAGAAGAGAATGAACCTGAAAGCACGTCAACTTCTGAACCTAAGTCTTCAAAGCCCAAGAGCAATAAATGGAAACCCGAGGAAGTGAAGAAACTGATTGGTATACGTGGGGATATGCACGAAAGATTTCAAGTTGTGAAGGGGAGAATGGCCCTCTGGGAAGAGGTTTCTAAGAACTTGTTGGTTGACGGGATCGAAAGAAGTCCAGGGCAGTGTAAATCATTGTGGACATCTTTGGCACAAAAATACGAGGAGATCAAGGATGGGAAGAGAAGCAAGAAGAGTTTGCCGTATCTTGAGGACATGGATAGGATTCTGTCTGATAAAGATGCACTGGCAACAAAATG 2555 0.4157 MVACSYLSLCPYNLCCGPNLRRHSILCSVRSSAVIATDGSKAPRKRSRRAEGPKKSMEDSVQRRMEQFYEGSDGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWRHKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEHGIFLSSRLKIFRARKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDRQALEELSKEGVTLMMSDSTNILSPGRTTSESVVADALLRHISAAKGRIITTQFASNIHRLGSVKAAADLTGRKLVFVGMSLRTYLDAAWKDGKAPFDPSTLVKAEDIDGYAPKDLIIVTTGSQAEPRAALNIASYGSSHSFKLTMEDVILYSAKVIPGNESRVMKMLNRISEIGSTVIMGKNEGLHTSGHGYRGELEELLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEIYRPQKLDNLDENTLKGKIRITTRCLWLDKGKLLDALHKAAHAALSSCPINCPLAHMERTVSEVLRKMVRKYSGKRPEVIAIATENPAAVLADEVNTKLSGKSNVGPGISSLRKLVDGHIKENQSKKTQVKGDDSIDPEGPEENTATSSRAVNNSDEFRKSFIKSDNGSVPLKEQSSQLKKDGSEDTEENEPESTSTSEPKSSKPKSNKWKPEEVKKLIGIRGDMHERFQVVKGRMALWEEVSKNLLVDGIERSPGQCKSLWTSLAQKYEEIKDGKRSKKSLPYLEDMDRILSDKDALATK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00263 851 Gene3D - 760 821 - -
Bva05g00263 851 SMART Lactamase_B_5a 89 286 IPR001279 -
Bva05g00263 851 Pfam Myb/SANT-like DNA-binding domain 758 841 IPR044822 -
Bva05g00263 851 MobiDBLite consensus disorder prediction 670 688 - -
Bva05g00263 851 PANTHER RIBONUCLEASE J 1 851 - -
Bva05g00263 851 ProSiteProfiles Myb-like domain profile. 752 816 IPR001005 -
Bva05g00263 851 MobiDBLite consensus disorder prediction 670 761 - -
Bva05g00263 851 Gene3D - 81 493 IPR036866 -
Bva05g00263 851 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Bva05g00263 851 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
Bva05g00263 851 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 1 851 - -
Bva05g00263 851 ProSitePatterns Uncharacterized protein family UPF0036 signature. 435 463 IPR001587 -
Bva05g00263 851 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Bva05g00263 851 MobiDBLite consensus disorder prediction 41 59 - -
Bva05g00263 851 MobiDBLite consensus disorder prediction 38 59 - -
Bva05g00263 851 CDD GT1 758 823 - -
Bva05g00263 851 MobiDBLite consensus disorder prediction 691 706 - -
Bva05g00263 851 Gene3D - 278 428 IPR042173 -
Bva05g00263 851 CDD RNaseJ_MBL-fold 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00263 Bva-Chr5 1284885 1294260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00263 759 845 Trihelix Transcription Factor Family AT2G38250 32.584 9.77e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva05g00263 Lactamase_B_2 3.4e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00263 - - lang:109326906 1328.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00263 05 1284885 1294260 Bva05g00263 05 1284885 1294260 ECH