Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00259 aTGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAGTACCAAAAGATCTTCTTCTTCGGAAGATAAGCCTCCGTCACCAAAGCGTCAAAAGGTCGATAATGGTGGTTCGTCGGAGAAACCGATGCCGTCGACGGAGAATTCTAAAGAACTGTGTACTCCCGGGCCGCCGGCTGATCCCGGAGAATGTGGGTCCGGCGATGCTCAGATCGCCGTAGCGGGTGCAGCCGATGGTCTGAGTTCTGGCAAGGGCGATGCAGCGCCAGCTGTGGCTGTGGCTGCGCCGATCGCTGATGGGTCTTCGCCGACTTTGGTGGTTGATAAGCCCCCTCGTTCGTTCTCTTCGTGGAGTATATATCAGAAGCAAAATCCAAGTTTTGAGACTTCGACGCCATGGTGCAGGCTCCTGTCACAGTCTGCCCAGAATCCAACTGTTCCCATTTGTGTTCCGTGCTTCACGATTGGGTCTAGTAAAAATTGCAACTATACGTTGAAGGATCAGTCCTTGAGTGGAAATTTATGCAAGATCAAGCAAACCCAGCACGAGGGAAATACTGTGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTTGTAAATGGGACAGTTGTCAAGAAGAATACAAGCCGTCTGCTTAACTCGGGCGATGAGGTGCTCTTTGGTTTTCTGGGAAATCATTCTTATATTTTTCAGCAATTAAATACTGAGGTTGTAATTAAGGGTGCAGAAGTTCAGAGTGGTGTTGGGAAATTTCTGCAGCTTGAAAGGAGAACTGGAGACCCTTCAGCTGTGGCCGGGGCTTCTATTTTGGCTTCTCTATCTAACTTCAGACAGGATAGTTCAAGATATAAACCTACATCTCAGAATGCCAATAAAGCTCACCAGGGTACTGATGTCTCTCCCCATTCTGTACCACGTGATAGTACAGAAATTGAGATTGATGGCCTGGAAGGAAACTCAACTCCAAATGTAGGGAGTGATAAAGCAGCTGATGTTGCAGCAAGCAACAAGAACTCTCCCATTGACTGCGATCCAGATGTTGACACAGAGGCAGGCAATGTattggaagaaagaaatgggACAAGGGATACGCAGCCAGCATCGAGTTTGGGTATGTCTGTGCGCTGTGCGGTGTTTAAGGAAGATGTTCACGCTGCAATACTGGATGGAAGGGAGATAGAAGTGTCATTTGACAACTTCCCGTACTATTTAAgTGAGAATACAAAAAATGTCTTGGTCGCAGCTTGCTTTATTCATCTGAAGCATAAAGAACATGCAAAGTACACCACAGATCTTACCACCATAAACCCTCGTATATTGCTGTCAGGTCCTGCAGGTTCAGAAATATATCAGGAGATGTTAGCAAAAGCACTTGCTAATTACTTTGGGGCAAAATTGCTCATCTTTGATAGTCACTCGCTTTTGggtGGTTTATCTTCCAAGGAAGCTGAGTTActcaaagaagaaatgaatgtTGAAAAATCCTGTAGCTGCAGCAAGCAAGGCCCTATAACTACAGACTTTGGTAGGGGTACGGATCCATCAACTAGCGAAACAGACACACCTAGCTCTTCAACTGCACCTCTTCCATATGGCCTTGAATCTCAACCTAAGTTGGAAACTGATGCAATACCCTCTTCCTCTGGCACAGCTAAAAATTGCTTGTTTAAATTAGGTGACAGGGTAAAATTTAGCTGTTCATCTTCTGGTGGTTTATATCAGGCATCTTCTTCAAGGGGCCCTCCTAATGGAAGTCGGGGGAAGGTtgccttaattttttatgagaatccTTTGTCAAAAATTGGTGTAAGATTTGATAAACCTATACCCGATGGAGTTGATCTTGGAGGTGCCTGTGAGAGTGGTCAAGGATTTTTCTGCAATGTTACTGATCTTCGATTAGAAAATAGCACTGCAGAAGAATTGGACAAATCACTCATCAATACATTATTTGAGgTTGTGTATAGTGAGAGCAGAAGTGCACCTTTCATTTTGTTCATGAAAGATGCTGAAAAGTCTATTGTGGGAAATGGAGATCCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCGGACAATGTGGTTGTAATAGGTTCACACACACATACTGACAGTCGAAAAGAGAAgTCACATCCTGGAGGTTTGCTTTTTACAAAGTTTGGTAGCAATCAAACTGCCCTTCTTGACTTGGCTTTCCCGgATAGCTTTGGAAGATTGCATGACAGAGGGAAGGAAGTCCCTAAGCCAAATAAAACTTTGACTAAGCTTTTTCCAAATAAAGTAACCATTCATATGCCACAGGATGAGGCACTTCTAGCATCATGGAAGCAGCAATTGGACCGAGACGTTGAGACTCTaaaaatcaaaggaaattTGCATCAGCTGCGCACAgttTTGGGTCGTTGTGGGATGGAAGGTGAAGGACTTGAGACCTTGTGCACCAAGGATCAGACACTTACTAATGAAAATGCAGACAAGATAATTGGTTGGGCATTGAGCCACCACCTGATGCAGAATCCTGAAGCTGATACTGATGCAAAACTTGTATTATCTTGTGACAGTATCCAGTATGGAATAGGGATCTTGCAAGCTATCCAGAATGAGTCCAAGAGCATGAAGAAGTCATTAAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTCTTGGCTGATGTTATTCCACCGAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACAATGAAGGAGTTGGTGATGCTTCCTTTACAAAGGCCTGAACTTTTTTGCAAGGGGCAACTGACCaagCCTTGCAAGGGTATCCTATTGTTTGGTCCCCCTGGAACAGGTAAAACAATGCTCGCTAAGGCCATTGCTACTGAAGCTGGTGCAAACTTCATCAACATTTCTATGTCAAGCATTACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAGGCTGTTTTCTCTTTGGCTAGCAAAATTGCTCCTAGTGTTATATTTGTTGATGAGGTTGATAGTATGTTAGGCCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGcgaaagatgaaaaatgaattcatGGTGAATTGGGATGGCCTACGTACAAAGGATACTGAGCGAGTTCTTGTACTTGCTGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATTCGGAGGCTGCCACGAAGATTGATGGTGAATTTGCCAGATGCTCCAAATAgagcaaaaatattaaaagttatacTGGCAAAAGAGGACCTGTCTCCTGACATTGATTTGGATGCAATTGCAAGTATGACGGATGGATATTCTGGAAGTGACCTTAAGAATTTATGTGTAACTGCTGCACACCGACCAATTAAAGAGAtattggaaaaggaaaaaaagGAGCGTGCTGCAGCTCTAGCAGAAGGTAGACCTGCTCCGGCTTTAAGTAGCTGTGGTGATATCCGATCTTTGAATATGGAAGACTTCAAATATGCTCACAAACAGGTATGTGCGAGTGTTTCCTCAGAATCCGTAAACATGACTGAACTATTACAATGGAATGAATTGTATGGCGAGGGTGgttcaagaagaaagaaagcacTCAGCTACTTCATCCTCGCGAGAGAAACTGTGGAGCTCCTTCTGGATACGTTTCACGCGGTGTCTAAGGTTGAGAAACTAATAAAGGAGTTGCCTAGTGTAACCACTGATTGGTCAAATGGAGATGTAAATTTGGCAGAGCGAAATTCCATGAACAATGGGATCTCTTTGCAACATGTTGAGAATGTTACAAATATCAGAGAGACTCAAAGCATGCTGCTAGAGAGAATAGCCAGTGAAATGAACCGGCTAAAGTTCTATGTGACACATGCAAAGATGTGGATAAAATTTGAAGCAAGATGTGACATAAAGTCTGGAGCTGAGGTTATTAAATACGAACGTTTCATTGAGTGGCTTTATGATTCGAAGGAATTGAGTGGAACAAGTGGGGAACATATTTGTAGAAACTTACCAATAGCTAATGGGGTACAATTTGGAACTCCAGTACAGAACCTGCCTTTTATTGAGAACATGGAGAAGAGGGTGCAAAATCCTAGCCTAATATTAGATGCAAGCTTGGGACACTGTTTTGTAGATGGTCTGGAGCACAGGGATGCAACTGCAATTTACAATTGCTTACGAGCATATGCTGCAATTGATAACACCAAGAATGCAGAAGAAATCTTCCGAACAACTGTTGTGGCTCCATTGGTACAGAATATTATTCCACATGGATCATTGCCCATGGCTGCTGCGTCATCTGGAGATGGACTTGATAGTGATTATCTGCAAATTAAGGATTGCATtgataaagaatg 4367 0.4186 MVSTRRSGSLSGNSTKRSSSSEDKPPSPKRQKVDNGGSSEKPMPSTENSKELCTPGPPADPGECGSGDAQIAVAGAADGLSSGKGDAAPAVAVAAPIADGSSPTLVVDKPPRSFSSWSIYQKQNPSFETSTPWCRLLSQSAQNPTVPICVPCFTIGSSKNCNYTLKDQSLSGNLCKIKQTQHEGNTVAVLESTGSKGSVLVNGTVVKKNTSRLLNSGDEVLFGFLGNHSYIFQQLNTEVVIKGAEVQSGVGKFLQLERRTGDPSAVAGASILASLSNFRQDSSRYKPTSQNANKAHQGTDVSPHSVPRDSTEIEIDGLEGNSTPNVGSDKAADVAASNKNSPIDCDPDVDTEAGNVLEERNGTRDTQPASSLGMSVRCAVFKEDVHAAILDGREIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTTDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHSLLGGLSSKEAELLKEEMNVEKSCSCSKQGPITTDFGRGTDPSTSETDTPSSSTAPLPYGLESQPKLETDAIPSSSGTAKNCLFKLGDRVKFSCSSSGGLYQASSSRGPPNGSRGKVALIFYENPLSKIGVRFDKPIPDGVDLGGACESGQGFFCNVTDLRLENSTAEELDKSLINTLFEVVYSESRSAPFILFMKDAEKSIVGNGDPYSFKSKLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDVETLKIKGNLHQLRTVLGRCGMEGEGLETLCTKDQTLTNENADKIIGWALSHHLMQNPEADTDAKLVLSCDSIQYGIGILQAIQNESKSMKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTMKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAIATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDIDLDAIASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGRPAPALSSCGDIRSLNMEDFKYAHKQVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFILARETVELLLDTFHAVSKVEKLIKELPSVTTDWSNGDVNLAERNSMNNGISLQHVENVTNIRETQSMLLERIASEMNRLKFYVTHAKMWIKFEARCDIKSGAEVIKYERFIEWLYDSKELSGTSGEHICRNLPIANGVQFGTPVQNLPFIENMEKRVQNPSLILDASLGHCFVDGLEHRDATAIYNCLRAYAAIDNTKNAEEIFRTTVVAPLVQNIIPHGSLPMAAASSGDGLDSDYLQIKDCIDKE 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00259 1455 Gene3D - 902 1183 IPR027417 -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 1 67 - -
Bva05g00259 1455 Gene3D - 132 240 - -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 499 533 - -
Bva05g00259 1455 Pfam AAA+ lid domain 1097 1132 IPR041569 -
Bva05g00259 1455 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 78 1208 - -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 282 306 - -
Bva05g00259 1455 SUPERFAMILY SMAD/FHA domain 109 233 IPR008984 GO:0005515
Bva05g00259 1455 Pfam ATPase family associated with various cellular activities (AAA) 944 1073 IPR003959 GO:0005524|GO:0016887
Bva05g00259 1455 MobiDBLite consensus disorder prediction 499 536 - -
Bva05g00259 1455 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 903 1184 IPR027417 -
Bva05g00259 1455 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 78 1208 - -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 282 369 - -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 1 21 - -
Bva05g00259 1455 CDD FHA 133 233 IPR000253 GO:0005515
Bva05g00259 1455 Pfam FHA domain 154 223 IPR000253 GO:0005515
Bva05g00259 1455 ProSitePatterns AAA-protein family signature. 1047 1066 IPR003960 GO:0005524|GO:0016887
Bva05g00259 1455 CDD AAA 942 1075 - -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 22 36 - -
Bva05g00259 1455 MobiDBLite consensus disorder prediction 38 52 - -
Bva05g00259 1455 Gene3D - 1076 1170 - -
Bva05g00259 1455 SMART AAA_5 940 1077 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00259 Bva-Chr5 1257620 1270565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00259 903 1152 Calmodulin-binding Proteins AT3G56690 40.078 1.03e-41 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00259 - - aprc:113849024 1954.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00259 05 1257620 1270565 Bva05g00259 05 1257620 1270565 ECH