Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00258 ATGTCTTCGGTTGTTCTCAGTCTCAAGAGAGTCAGTTGCACAGGGATCCCCGCCTCCATTCCTCAAGCTAAAATGGCTGTCGCATTCAATGACCTACACTCTGCATCCGGGTTGAAGAAGCTTGATGATTACCTTATCAGCCGCAGTTACATCACCGGGTACCAAGCTTCAAAGGATGATGTCATAGTATACGCTGCTTTGTCCAAGGGACCATCTACCGAATACGTGAATGTCTCCCGATGGTATAATCACATCGACGCTTTATTGAGGATATCGGGTGTTTCTGGAGAAGGATCTGTTGTCATTGTGGAAGGATCACTTCCCACAACAGAAGAGGCTGTTCCCACTCCTCCAGCTGTTGATTCAAAGGCCACTGCAGccgatgatgatgatgatgatgatgtcgATTTGTTTGGTGAAGAGACAGAGGAGGAAAAGAAGGCTGCTGAGGAACGTGCGGCTGCAGTCAAGGCATCTGCCAAAAAGAAGGAGTCCGGCAAATCATCCGTACTATTAGATGTGAAGCCATGGGATGATGAAACCGACATGAAAAAGCTTGAGGAAGCTGTGAGAAGTGTTAACATGGAAGGATTGCTTTGGGGTGCATcGAAACTTGCTCCTGTTGGGTATGGTATcaagaaattacaaattatgcTTACTATTGTGGATGACCTGCCTTCAACAAAATATAATCTACAATCCATGGGATTTGGACGATCGAGTCAGTA 728 0.4341 MSSVVLSLKRVSCTGIPASIPQAKMAVAFNDLHSASGLKKLDDYLISRSYITGYQASKDDVIVYAALSKGPSTEYVNVSRWYNHIDALLRISGVSGEGSVVIVEGSLPTTEEAVPTPPAVDSKATAADDDDDDDVDLFGEETEEEKKAAEERAAAVKASAKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVNMEGLLWGASKLAPVGYGIKKLQIMLTIVDDLPSTKYNLQSMGFGRSSQ 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00258 242 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 25 228 - -
Bva05g00258 242 SUPERFAMILY eEF-1beta-like 164 228 IPR036219 -
Bva05g00258 242 MobiDBLite consensus disorder prediction 108 136 - -
Bva05g00258 242 SUPERFAMILY GST C-terminal domain-like 35 91 IPR036282 -
Bva05g00258 242 CDD EF1B 165 228 IPR014038 GO:0003746|GO:0006414
Bva05g00258 242 PANTHER RIPENING REGULATED PROTEIN DDTFR10-LIKE 25 228 - -
Bva05g00258 242 Pfam EF-1 guanine nucleotide exchange domain 169 228 IPR014038 GO:0003746|GO:0006414
Bva05g00258 242 Gene3D - 160 234 IPR014717 -
Bva05g00258 242 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 131 139 IPR001326 GO:0003746|GO:0005853|GO:0006414
Bva05g00258 242 SMART EF1_GNE_2 167 240 IPR014038 GO:0003746|GO:0006414
Bva05g00258 242 Gene3D - 22 100 - -
Bva05g00258 242 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00258 Bva-Chr5 1253960 1256861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00258 28 227 Eukaryotic Initiation Factors Gene Family AT2G18110 81.000 8.44e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00258 K03232 - pvy:116136344 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00258 05 1253960 1256861 Bva05g00258 05 1253960 1256861 ECH