Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00255 ATGGCCACTACGACCACTAGTCTTGGCGGTGGTGGAGAGGACCGAGTTCTTGCCACAGCTCAGCAGATCGTGAAGAGCCTCAACACCCCCAAAGAGGTTCGTGAAGACATGCTTATGATATTTTCTAGCTTCGATAATCGCCTTTCTAATATTACCGATCTTGTCAAGTCTTCTGACGAAGAAGACCTTCACCGCTTTGAAGCGGCGGAGAAAGTCATTCTCCACTGGGACGCCTCACTGTCCGGTGAAGCTTCTCGCCAGTCCACCTCGATTCTCGATTCCCCTGATGATGCCGAGGAGTATTTCTCAGCTGTGGATGAGATCATTCAATGGATTGAAGAAATTTCGATCTCACCCTCCGGTGAAAACAACCAAATTTTGGTGGACCGGACGGAGAACGCGATTCAGCTTGCCATGTTGAGGCTGGAGGATGAGTTGCGTCATGTATTGATTCAGAACACAGTCCCACTTGACGCTGAAAGGCTTCATGGCTCCGTCAAGAGAATCACTCTCTCGTTTGCATCTACTGATGGCTTGATCGCTGAAAATTTAGAGAGCTTCGGCGAGGTCAATGATGGCGGTTCTCAGCGGTTCCATGAGCGTGGTGCAAGCTTGGATGGTGATATATTGGTAGATTTGATACACCCTGATGCTGTGGTTGAGCTGAAAGAGATTGCTGATCGAATGATAAGGTCTGGATATGAAAAGGAATGCCTTCAGGTTTATAGCAGTGTTCGCCGTGATGCTTTTGATGAGTGTCTGGTTATCCTGGGTGTTGAGAAAGAGAGTATTGAGGAAATTCAGACTGTTGCGTGGACACCTTTGgatgtgaaaatgaagaattggGTACAAGCTATGAAAATTACTGTCAAGGTGCTCTTGACAGGCGAGAAGAGGCTATGTAATAGCATATTTGGTGAATTGGATGAGATAAAGGAGATCTGTTTCAATGACACTGCAAAAGGGTGTCTCATGCGGTTGTTGAACTTTGGCGAGGCCATTGCAATTATCAAAAGATCGGCAGAGAAGCTGTTTAGGATATTGGATATGTACGAAGCATTAAACGATGTGATGCCTGAACTGGAGAAAATGGTCTCTGATGAGTTTGTGATCTCTGAGGCCAGAGGAGTTCTAAATGGACTTGGTGAGGCAGCTAAGGGGTCATTTGCTGACATTGAGACTCGTATTCGGACTGACGATCCTACAAAAACATCTAACACTGGTGATGTTCACCCTATGCCACGTTATGTAATGAACTACTTGAAGTTACTTGTCGATTATGGTGAACCTGCGGATTCACTTATACAATTTAGTGAAGATGATCTGAAACGTTTTGAAAACAACTATAGTGGTGATAGTTCATATTTAGGGACTATGTCCCCTTTTGGACTCAGTATTCTGTTCGTAATATCGAAGCTTGAGTGTAATCttgatgaaaaatcaaaactttatgAAGACCCTGCAATGCGGTATGTATTTATGATGAACAATATCTATTACATAGTACAGAAAGTGAAAGAGTCTGATCTTCGGAAGGTCTTGGGAGATGATTGGATCCGTAAACGCCGGGGTCAGATACGCCAGAACGCTACGGGCTATCTTAGAGCCGCCTGGACCAAGGCATTGTCCTGTTTGAAGGATGAAGGGATTGGTGGGAGCACTGGGAATGCCTCAAAGATGGCTTTGAAAGAGAGGTTTAAGAATTTCAATGCTTGCTTTGAGGAAATTTATAGGAATCAGACAGCTTGGAAGGTGCCCGATGCTCAACTTCGAGAAGAGCTACGAATTTCTATATCAGAGAAGGTAATTCCAGCTTATCGCTCATTTGTGGGGAGGTTTAGAGGTCAGCTAGAGAGTGGAAGGAATGCTGGGAAGTACATAAAGTATTCACCAGAGGATTTGGAGAACTATTTATTGGATTTATTTGAAGGATCACCTGGTGTCTTGCACCACATAAGGAGAAAAAGTACATA 1973 0.4364 MATTTTSLGGGGEDRVLATAQQIVKSLNTPKEVREDMLMIFSSFDNRLSNITDLVKSSDEEDLHRFEAAEKVILHWDASLSGEASRQSTSILDSPDDAEEYFSAVDEIIQWIEEISISPSGENNQILVDRTENAIQLAMLRLEDELRHVLIQNTVPLDAERLHGSVKRITLSFASTDGLIAENLESFGEVNDGGSQRFHERGASLDGDILVDLIHPDAVVELKEIADRMIRSGYEKECLQVYSSVRRDAFDECLVILGVEKESIEEIQTVAWTPLDVKMKNWVQAMKITVKVLLTGEKRLCNSIFGELDEIKEICFNDTAKGCLMRLLNFGEAIAIIKRSAEKLFRILDMYEALNDVMPELEKMVSDEFVISEARGVLNGLGEAAKGSFADIETRIRTDDPTKTSNTGDVHPMPRYVMNYLKLLVDYGEPADSLIQFSEDDLKRFENNYSGDSSYLGTMSPFGLSILFVISKLECNLDEKSKLYEDPAMRYVFMMNNIYYIVQKVKESDLRKVLGDDWIRKRRGQIRQNATGYLRAAWTKALSCLKDEGIGGSTGNASKMALKERFKNFNACFEEIYRNQTAWKVPDAQLREELRISISEKVIPAYRSFVGRFRGQLESGRNAGKYIKYSPEDLENYLLDLFEGSPGVLHHIRRKST 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00255 657 Pfam Exo70 exocyst complex subunit 280 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
Bva05g00255 657 Gene3D Exocyst complex component Exo70 72 648 - -
Bva05g00255 657 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 45 656 - -
Bva05g00255 657 SUPERFAMILY Cullin repeat-like 82 643 IPR016159 -
Bva05g00255 657 PANTHER EXOCYST COMPLEX PROTEIN EXO70 45 656 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00255 Bva-Chr5 1242180 1244552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00255 14 656 EXO70 exocyst subunit family AT5G50380 59.287 0.0 771
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00255 K07195 - gmx:100809716 936.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01564 06 11184714 11189681 Bva05g00255 05 1242180 1244552 BWGD
Bva05g00255 05 1242180 1244552 Bva05g00255 05 1242180 1244552 ECH