Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00250 ATGGCGTCTCTGCAACAGGGTCTAACCTCGCTCCCGTCCAACCACATTCATCACACGCAAACCCCGAGAAACTTCCTCACTTATAAACCCCTCCtcaatttttccttctctggCACCACTTTCCCTTCACTCAAACTGAAATTTGTCGGCGccgccaccacccgcccatccAATGGTGGCCTCGGAGCTAAAATGGTTGCAACCGCCGCTTCCAGCTATGCTCAGGCCCTCGCCGATGTGCCGAGGCCAACAATACCCTCGACGCCACAACCACTGATATCGAGAAAATCGAGGAAATCTTCTCTGATCAACaaCTTTCAGCCCCATACCCGCAGCTTCCTCAACATTTTAGTTGATGCCAAGAGGACTGATCTAATAAAGGAAATAACCAAGGAATTTGAGTACGTCTATGACAAGTTGACTAACACGGAGTTGGCAGTGGTGAGTTCGGTGGTGAAGTTGGAATCGGAGCACTTGTCTCAGATCGCGAAGCAGGTTCAGAAGTTGACTGGGGCCAAAAATGTGAGAATCAAGACGGTGATTGACCCTAGTTTGGTGGCTGGCTTCACCATCAGGTATGGGAATTCAGGATCTAAGTTGATTGACATGAGCGTGAAGAAGCAACTTGATGAAATTGCTGCTCAGCTTGATTTGGGTGACATCAAACTTGCAGTACGAGCCCAGAAAGTGGAAAACATCCATTGTTTATGGTTATG 716 0.4539 MASLQQGLTSLPSNHIHHTQTPRNFLTYKPLLNFSFSGTTFPSLKLKFVGAATTRPSNGGLGAKMVATAASSYAQALADVPRPTIPSTPQPLISRKSRKSSLINNFQPHTRSFLNILVDAKRTDLIKEITKEFEYVYDKLTNTELAVVSSVVKLESEHLSQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTIRYGNSGSKLIDMSVKKQLDEIAAQLDLGDIKLAVRAQKVENIHCLWL 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00250 238 PANTHER ATP SYNTHASE DELTA CHAIN 32 80 IPR000711 GO:0015986|GO:0046933
Bva05g00250 238 PANTHER ATP SYNTHASE-RELATED 32 80 - -
Bva05g00250 238 Pfam ATP synthase delta (OSCP) subunit 99 216 IPR000711 GO:0015986|GO:0046933
Bva05g00250 238 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 66 142 IPR026015 -
Bva05g00250 238 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 90 216 IPR000711 GO:0015986|GO:0046933
Bva05g00250 238 Hamap ATP synthase subunit delta [atpD]. 65 218 IPR000711 GO:0015986|GO:0046933
Bva05g00250 238 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 175 194 IPR020781 GO:0015986|GO:0016020|GO:0046933
Bva05g00250 238 PANTHER ATP SYNTHASE DELTA CHAIN 105 225 IPR000711 GO:0015986|GO:0046933
Bva05g00250 238 PANTHER ATP SYNTHASE-RELATED 105 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00250 Bva-Chr5 1221020 1222006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00250 1 224 Primary Pumps ATPases AT4G09650 50.980 6.55e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00250 K02113 - gmx:100819224 239.965