Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00246 atggaagaagaagagcaaAAGGAACTCGAGCTTTTACCTTCAGGGCACTCTATAACGTCGACATCGCACGTGGCGTCTGATTCTTCAATGTTAAGGTTGCTATCAACGGTGTCGTCGGAAGGGACTCCCTCACTGGACCTACAGTTATCGATCAGCGTAAGGCCAATACGACCGTCTTCGGAGTGTGTTTTGATGCAGCACGAGGTGAGCTGCCTGGAAGGTCTCAAGTGGCAAGCTGCCGAGCAAATACGGCTTGCGGCGATGGAGAAGGCTTATGCAGAGAGAGTGAGGGAGCTGACAAGGAGGGAGATGGAGCTGGCGCAGTCTGAGTTCACACGCGCGAGGCAAATGTGGGAGAGAGCCAGGGAAGAGGTTGAAAGAGCAGAGAGAATGAAAGAGAGGGCCACTAGTCAGGTTGATTCTACGTGCATGGAGATTACTTGCCAATCCTGCAGACAAAGGTTCAGGCCTTA 473 0.5074 MEEEEQKELELLPSGHSITSTSHVASDSSMLRLLSTVSSEGTPSLDLQLSISVRPIRPSSECVLMQHEVSCLEGLKWQAAEQIRLAAMEKAYAERVRELTRREMELAQSEFTRARQMWERAREEVERAERMKERATSQVDSTCMEITCQSCRQRFRP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00246 157 Coils Coil 111 138 - -
Bva05g00246 157 MobiDBLite consensus disorder prediction 1 23 - -
Bva05g00246 157 PANTHER OS03G0310200 PROTEIN 1 157 IPR039288 GO:0009630
Bva05g00246 157 PANTHER OS03G0310200 PROTEIN 1 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00246 Bva-Chr5 1198314 1198880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00246 44 156 C2H2 Transcription Factor Family AT2G01940 35.965 2.24e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00246 - - csv:101213814 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00246 05 1198314 1198880 Bva05g00246 05 1198314 1198880 ECH