Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00241 ATGGAGAACAACCAGCAAGCTCAATCCTCCTCATACCCACCACAACCCACTGCTCCTGCCCCTGCTTCTTTCCACCACCTACTCCAACAGCAACATCAGCAACTTCAGATGTTCTGGAAGTACCAGCGCCAAGAAATCGAGCACGTCAATGATTTCAAAAACCACCAGCTCCCTCTCGCGCGCATCAAGAAGATCATGAAGGCCGATGAAGACGTTCGCATGATCTCTGCCGAAGCACCCATATTGTTCGCCAAGGCCTGCGAGCTTTTCATTCTCGAGCTTACCATACGATCTTGGCTCCATGCTGAGGAGAACAAGAGGAGGACTTTGCAGAAGAACGATATAGCCGCTGCCATTACCAGGACTGATATATTCGATTTCCTGGTCGATATTGTGCCCAGGGATGAGATCAAGGACGAGGCTGGCCTTGGTGGGATGGTGGGGACCACAGCAAGCGGCGTCCCGTACTACTATCCTCCCATGGGGCAACCGGCTGGCCCTCCCGGTGGCATGATGATTGGACGGCCGGCGATGGATCCCACGGCGGTTTACGGGCAACCTCCTTCGCAAGCATGGCAATCGGTGTGGCAACCTGCTGCGGAGGATGGCTCATACGGGAGCGGCGGCAGCAGTGGACAGGGCAACCTCGATGGTCAGAGTTG 662 0.5559 MENNQQAQSSSYPPQPTAPAPASFHHLLQQQHQQLQMFWKYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGTTASGVPYYYPPMGQPAGPPGGMMIGRPAMDPTAVYGQPPSQAWQSVWQPAAEDGSYGSGGSSGQGNLDGQS 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00241 220 Gene3D Histone, subunit A 22 134 IPR009072 GO:0046982
Bva05g00241 220 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 220 - -
Bva05g00241 220 MobiDBLite consensus disorder prediction 1 21 - -
Bva05g00241 220 Pfam Core histone H2A/H2B/H3/H4 30 119 IPR007125 GO:0003677
Bva05g00241 220 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 220 - -
Bva05g00241 220 MobiDBLite consensus disorder prediction 204 220 - -
Bva05g00241 220 SUPERFAMILY Histone-fold 11 128 IPR009072 GO:0046982
Bva05g00241 220 MobiDBLite consensus disorder prediction 182 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00241 Bva-Chr5 1179318 1182824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00241 22 219 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.235 2.94e-109 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bva05g00241 Histone 1.8e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00241 - - cmax:111500215 318.546