Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00240 ATGGAATGTAATAAAGAGGAGGCCATTAGGGCTAAAGAGCTTGcagagaagaaatttttagaGACAGACATTGCTAGCGCAAACCGACTTGCCTTGAAGGCTCAAAACTTGTATCCCAATCTTGATGGTCTCTCTCAGCTTCTGGCAACTCTTGAGGTTTATGTCTCTGCGGAGAACAGAATTAATGGAGAAGTTGACTGGTACAAGGTCCTTGGTGTGGAACCATTGGCTGATGATGAAACCATTAGGAGACGCTACAAAAAACTGGCCCTTATTCTACACCcagataaaaacaaatcagTAGGTGCGGATGGGGCTTTTAAACTTCTATCTCAGGCATGTAAATTATTGTCTGATAAAGCCCAGAACAGGAAGCAGATTTTACCGGGTATATATGAAGAAACTTCAAACTGGAAATCTTCTGTATCGGTGAGCCACAATGGATTCTTTGATTTCTTCAGTAATGGAAATGGAAGGCCTTCTGAACCGGCTAGCCAGaatgttttctttgatttcttcaGTACTGGTAATTGGAAAGATAGAACTGTTGATCATCCTGATCCTACTCCAACATCTCCTTTGTCATTGAAACCTACATTTTGGACCATGTGTAGTGCTTGTAAAACACGTTTTGAGTACCAAAGGATTTATATCAACTGCAATCTTGTTTGCGCTGTCTGCCGCCAGCACTTTTTCTCTATTGAGGTATCACCTGCACCCATATACAATGATTCTGTATCCTCTTCAAGAATTTCTCTGATGCAGCGACAGAAATTTAAATCAGCTAGAGTGGAAAGAAGCTCTCATGTTTCAGGCAGGATGCCAGCTTCTGCTACCAACTCATCAGAACAAATATTTGGGTCAGGTCCTTTCTCTATGCCAGGTGGTATATACGGTGTCTCAACCTCACTTTCTTCTATCTCTGAATCTGATAGTGCTCTTGGGCTATCGGATCAGTTGAAGAGAAGGCGTGAAGATTCAATGTCTACAATACCTCCTACCATGAAGGAGGTCCATTTTGGGAAAATTCAAGATGCTAAGCCTAATGCTGACGGTTCAGCTTTTCAATCCTCTTGTGTTGGTTCCGATTCTGTTATGAAAGCAGATAGGCCAAGGAAAAAAAGACACATTTATGAACGTAGAGTGGATATTGATAGGAGAGAGATGGAAACTGAAATGGCATCTCAAAATGAAGGAATAAGCTGTGGCAACTTAGAAACAGGAAGGGTTAATGCTGCTGGATTCTCTAAGCGGGATGGGATGAGGGACACATCCCAGGTACAGATTAGGAACATGTTGATTGAAAAGGCTAGGAAGGAAATTCGTAGCAAACTTAAGGAATGGAATGTTTCTTCTGAGTCGAGGAATTTAGACAAGTCAAAGAATACTGACAAGGAAGCCAAAGAGGAGGACAAAGAGAGGAGTAGAAATTGCATCCAGTCTGGTTCAGAAGAATTCCAGAAGTTTTCTGAGGCTATGGGCAAAAGGCCTAACTCTGCTGATTTTGATGTTTGTACTTCAGAGGCGAGTGGCTCTCTGTCTATGAGTGTACCAGACCcagactttcatgattttgaCAAGGACCGTACTGAAAAATCATTTGGTGGGAATCAGGTGTGGGCTgtttatgatgatgatgatggcaTGCCCCGCTACTATGCTCTGATTCATGgcataatttctttaaaaccATTCAAATTGAGGATTAGTTGGCTTAACTCTAAAAGCAATGATGAGCTGGCCCCAATAAAGTGGGTTAGTTCTGGCTTTCCGAAGACTACTGGGGATTTCCGAATAGGCAAGCATGTATCTAATGGGTCTCTCAATTCCTTCTCACACAGGATCAAGTCAACAAAAGGTTTAAGGGGGACTATACATGTATATCCTAAGAAGGGGGACGTTTGGGCTTTGTATAGAAACTGGTCCCTTGATTGGAATGAACTCACTCCAGAtgaaattatacataaatatgaCATGGTGGAAGTGCTTGAAGACTACAATGAGGAGCGAGGTGTGAATGTTGCTCCACTTGTTAAAATTTCTGGTTTCAAGACAGTATTCCGTCGGCATGCAGATCCAAGAAAAGTCAGGAGTATTCCAAGGGAAGAGATGTTTCGTCTCTCACACCAGGTACCTTCCTACTTGCTGACTGGTCGAGAAGGTCCTAATGCCCCTAGGGGTTGCTTGGAGCTTGATCCTGCTGCTATACCTATGGAACTTCTTCAGGTAGTAACAGAAGCTCCGAAAGAAGAAACAGTTTTGACAGTTGATAATTCAGTAGAAAATATAGCAAGAGAGGTGGTGGCTGaaacaatagaaaagaaagaaactaggCTAGAGAATATGATTGTGTATAAGCGAAAACGAGTAAGGCAACGGGATTCTTCTAAAATGGCAAGTCATAGTTA 2408 0.4003 MECNKEEAIRAKELAEKKFLETDIASANRLALKAQNLYPNLDGLSQLLATLEVYVSAENRINGEVDWYKVLGVEPLADDETIRRRYKKLALILHPDKNKSVGADGAFKLLSQACKLLSDKAQNRKQILPGIYEETSNWKSSVSVSHNGFFDFFSNGNGRPSEPASQNVFFDFFSTGNWKDRTVDHPDPTPTSPLSLKPTFWTMCSACKTRFEYQRIYINCNLVCAVCRQHFFSIEVSPAPIYNDSVSSSRISLMQRQKFKSARVERSSHVSGRMPASATNSSEQIFGSGPFSMPGGIYGVSTSLSSISESDSALGLSDQLKRRREDSMSTIPPTMKEVHFGKIQDAKPNADGSAFQSSCVGSDSVMKADRPRKKRHIYERRVDIDRREMETEMASQNEGISCGNLETGRVNAAGFSKRDGMRDTSQVQIRNMLIEKARKEIRSKLKEWNVSSESRNLDKSKNTDKEAKEEDKERSRNCIQSGSEEFQKFSEAMGKRPNSADFDVCTSEASGSLSMSVPDPDFHDFDKDRTEKSFGGNQVWAVYDDDDGMPRYYALIHGIISLKPFKLRISWLNSKSNDELAPIKWVSSGFPKTTGDFRIGKHVSNGSLNSFSHRIKSTKGLRGTIHVYPKKGDVWALYRNWSLDWNELTPDEIIHKYDMVEVLEDYNEERGVNVAPLVKISGFKTVFRRHADPRKVRSIPREEMFRLSHQVPSYLLTGREGPNAPRGCLELDPAAIPMELLQVVTEAPKEETVLTVDNSVENIAREVVAETIEKKETRLENMIVYKRKRVRQRDSSKMASHS 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00240 802 Pfam Domain of unknown function (DUF3444) 514 720 IPR024593 -
Bva05g00240 802 ProSiteProfiles dnaJ domain profile. 66 136 IPR001623 -
Bva05g00240 802 MobiDBLite consensus disorder prediction 448 479 - -
Bva05g00240 802 CDD DnaJ 66 119 IPR001623 -
Bva05g00240 802 SMART dnaj_3 65 122 IPR001623 -
Bva05g00240 802 Pfam DnaJ domain 66 122 IPR001623 -
Bva05g00240 802 PANTHER BNAC03G44070D PROTEIN 1 754 - -
Bva05g00240 802 PRINTS DnaJ domain signature 86 101 IPR001623 -
Bva05g00240 802 PRINTS DnaJ domain signature 102 122 IPR001623 -
Bva05g00240 802 PRINTS DnaJ domain signature 68 86 IPR001623 -
Bva05g00240 802 SUPERFAMILY Chaperone J-domain 58 121 IPR036869 -
Bva05g00240 802 Gene3D DnaJ domain 51 126 IPR036869 -
Bva05g00240 802 MobiDBLite consensus disorder prediction 448 503 - -
Bva05g00240 802 PANTHER HEAT SHOCK PROTEIN-LIKE 1 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00240 Bva-Chr5 1175394 1177802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00240 4 118 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.669 4.27e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00240 - - gmx:100797672 844.728