Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00239 ATGGTGCCACTGCATGAGAAGTTGAAGGTCTTTATGAGCCACAGATGGCTAGTGTTTGTGTGCGCCATGTGGGTGCAGTCATTTGCGGGTATAGCTTACATGTTTGGGAGCATATCCCCGATAATAAAGAGCACCATGGGTTACAACCAGAAACAAATTGCGATGTTGGGTTTGGCTAAGGATTTGGGTGACAATATTGGCTTTGTAGCTGGCAAAATCAGCGAGTTCTCACCCACTTGGTGTGTCTATCTTGTTGGGGTCGTCCATAATTTTGTGGGCTATGGCCTCGTTTGGCTTATTGTCACGCACAGGTTCCCTTCTCTGCCCTTGTGGGCTGTgtgcatttttatatttgtgggAACAAATTGTACTCCATATTACAACACAGCTTCTCTTGTTGCATGCGTGCAAAGTTTCCCAGAGAACAGAGGACCGGTAGTGGGCATCTTGAAGGGTTTTGTTGGGTTAAGTGGTGCAATTTTGACACAGATTGTTGCCATGATGAACACACATGATCAGGCATCTCTGATTCTTGTCATCGCACTTGGGCCCGCAACGGTTGCTGCTTGTCTAATGTTCATCATTAGACCCGTTCAAGGTTTCAAACAAGCCAGAGCATCTGATAGTTCAAGCTTCACATTTATCTATAGCATTTGCCTTCTTTTAGCAGCTTATCTGATGGGAGTCTTGCTGGTGGAAAATATCATGGTTTTGGACCCAAACATCGTTAAATTATTAGCAGTTATCTTATTCATTCTCGTATTGCTTCCAGCTATAATTCCCATTTTATTGGTTTTCCACTTGGAGCCTAAAAGGACAGATGGAGAAACTTTACTTCTAGAGCCTCCATTACAAGAAACAACAGTAGATGAGACtcaaattgaaaatgagaagCCTCCAAGACTACAGGTGCTTCCAGTGTCAGAAGGACCAAAGGAAATTGTTCAATTCCATGCTCGATTTTTCCAATCAGTTGCACAAGctgtgaagaaaataaagcgCAAAAATGGCCCGCGTATAGGGGAGGATTTCACCTTAACACAAGCAATGgccaaaattgaattttggcTTATCTTCTTCTCTCTAGTTCTTGGTGCGGGAACGGGTTtgacaattataaataatatgggTCAGATTTGCCAGTCATTGGGTGACAGCAATGCAAATGTGTATGTATCGATGCTCAGCATATCCAACTTCCTTGGTCGTGTTGGCGGTGGCTACTTCTCAGAGGTCGTCGTAAGAAATTTTGCGTATCCAAGACTCTTTGCCTTGGCGGTGATTCAGGCGATTATGGCAATCGGATTCTCCTATTATGCAATAGGTTTGGTTGGACAACTTCACGTGGTGACCATATTGACAGGGCTTGGGTATGGTGCCCACTGGTCAATTGGGATAGCTTCAGCTTCAGAGCTATTCGGATTGAAAAACTTTGGGTCattgtataattttcttaCAATGGCATGTCCAGTTGGGTCTCTGTTTTTGTCTGGTTTTGTAGCCAGCACAATATATGACTATTACGCAGAGCAGCAAGCTAAGCACCGCATACAAATTTCTCACACTGAAGTACTTCTTTGCGAAGGAAAAATATGCTATTCTTTCACTTGTGGAATCTTAGCAGGAGTTAGCGTAGTTGCAACGGTCTTGAGCTTCACCGTAGTTCGCCGAACAAAGAAGTTCTATGCCCAACGTTATGCCAACTCTCTTTCTTG 1715 0.414 MVPLHEKLKVFMSHRWLVFVCAMWVQSFAGIAYMFGSISPIIKSTMGYNQKQIAMLGLAKDLGDNIGFVAGKISEFSPTWCVYLVGVVHNFVGYGLVWLIVTHRFPSLPLWAVCIFIFVGTNCTPYYNTASLVACVQSFPENRGPVVGILKGFVGLSGAILTQIVAMMNTHDQASLILVIALGPATVAACLMFIIRPVQGFKQARASDSSSFTFIYSICLLLAAYLMGVLLVENIMVLDPNIVKLLAVILFILVLLPAIIPILLVFHLEPKRTDGETLLLEPPLQETTVDETQIENEKPPRLQVLPVSEGPKEIVQFHARFFQSVAQAVKKIKRKNGPRIGEDFTLTQAMAKIEFWLIFFSLVLGAGTGLTIINNMGQICQSLGDSNANVYVSMLSISNFLGRVGGGYFSEVVVRNFAYPRLFALAVIQAIMAIGFSYYAIGLVGQLHVVTILTGLGYGAHWSIGIASASELFGLKNFGSLYNFLTMACPVGSLFLSGFVASTIYDYYAEQQAKHRIQISHTEVLLCEGKICYSFTCGILAGVSVVATVLSFTVVRRTKKFYAQRYANSLS 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00239 571 Gene3D Multidrug resistance protein D 3 196 - -
Bva05g00239 571 PANTHER NODULIN-LIKE/MFS TRANSPORTER 4 570 - -
Bva05g00239 571 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 570 - -
Bva05g00239 571 Pfam Nodulin-like 15 262 IPR010658 -
Bva05g00239 571 CDD MFS_Mch1p_like 14 548 - -
Bva05g00239 571 SUPERFAMILY MFS general substrate transporter 8 197 IPR036259 -
Bva05g00239 571 SUPERFAMILY MFS general substrate transporter 205 560 IPR036259 -
Bva05g00239 571 Gene3D MFS general substrate transporter like domains 348 563 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00239 Bva-Chr5 1169527 1172384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00239 5 569 Nodulin-like Gene Family AT5G14120 52.768 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00239 - - gmx:100784744 752.281