Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00218 ATGGCAAACGCAGATAGCACTAACTTCAAACTTGATGTAAGGCAAATAGGAGAACCAAGTCTGGTTCCGCCTGCAGAGGAAACAGCAAAAGGCCTGTACTTCCTTTCAAACCTTGACCAGAATCTAGCGGTTCCAGTAagaactttttattatttcaagtcTGCTTCCAGAGGAAATGAGGATGCTGCAGAAGTCATCAAGAATGCTTTGTCAAAGATTCTTGTTCCTTATTACCCTATGGCAGGAAAGTTAACTTTCAGCTCAGAAGAGAAGCTGATAGTGGATTGCACAGGGGAGGGTGCACTATTTGTTGAGGCTGAAGCAAACTGTGCTATAGAAGACATAGGAGATATGACAAAGCCTGACCCAGCAACTCTAGGGAAACTGATTTATGATCTCCCCGGTGCACAAAGCATACTTGAGGTGCCTCTTATGGTGGTTCAGGtgacaaaattcaaatgcgGAGGATTTACTTTGGGGTTAAGCATGAACCATTGCATGAAAGATGGAATATGTGCTATGGAATTTGTGAATGCATGGAGTGAGACTGCAAGAGGACTGGACTTAAAGGTTCCACCTTTTCTAGACAGAACCATACTCAAGGCGAGAATTCCTCCTAAGATAGAGTTCCCACACCatgaatttgatgaaattgagGATCTATCAGATAGCAGCAAACTTTATGAAGAAGAGATGCTCTACAAGTCCTTCTGTTTTGATCCAGAAAAGCTTGAGGTGCTTAAGAAAAAGGCCTTGGAAGATGGGGTTTTGGAAAAGTGCACAACTTTTGAAGCCCTCTCAGCTTTTGTGTGGAGAGCTCGAACTGAAGCCTTAAGGATGGATCCTGATCAACAGACAAAGCTACTCTTTGCTGCTGATGGCAGAGCTAGGTTTGTACCTCCAATACCGGAGGGTTACTTTGGCAATGCTTTTGTGTTCACAAATTCTCTAAGTAAAGCTGGGGAGCTATTGGAGAAGCCATTGTCATTCACAGTTGGCCTAGTTCATGAGGCTATTAAGATGGTTACAGATGATTATATGAGATCAGCCATAGACTACTTTGAAGTGACAAGAAGCAGGCCTTCCCTGACAGGGACCCTTTTGATCACAACTTGGGCTAAGTTATCTTTTCACACCACAGATTTTGGCTGGGGAGAACCTTTATTTTCCGGACCTGTGACCTTGCCAGAGAAAGAAGTCACTCTATTCATAGCAAATGTTGAAGAAAGGAAGAGCATTAATGTGCTTCTGGGTTTGCCTACCTATGCCATGAAAACTTTTGAAGAACTGATGCAGATATA 1301 0.4158 MANADSTNFKLDVRQIGEPSLVPPAEETAKGLYFLSNLDQNLAVPVRTFYYFKSASRGNEDAAEVIKNALSKILVPYYPMAGKLTFSSEEKLIVDCTGEGALFVEAEANCAIEDIGDMTKPDPATLGKLIYDLPGAQSILEVPLMVVQVTKFKCGGFTLGLSMNHCMKDGICAMEFVNAWSETARGLDLKVPPFLDRTILKARIPPKIEFPHHEFDEIEDLSDSSKLYEEEMLYKSFCFDPEKLEVLKKKALEDGVLEKCTTFEALSAFVWRARTEALRMDPDQQTKLLFAADGRARFVPPIPEGYFGNAFVFTNSLSKAGELLEKPLSFTVGLVHEAIKMVTDDYMRSAIDYFEVTRSRPSLTGTLLITTWAKLSFHTTDFGWGEPLFSGPVTLPEKEVTLFIANVEERKSINVLLGLPTYAMKTFEELMQI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00218 433 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 14 432 - -
Bva05g00218 433 Gene3D - 15 217 IPR023213 -
Bva05g00218 433 Gene3D - 218 432 IPR023213 -
Bva05g00218 433 Pfam Transferase family 20 431 - -
Bva05g00218 433 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00218 Bva-Chr5 1087521 1089405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00218 10 431 Monolignol Biosynthesis Gene Families AT5G48930 36.902 8.46e-97 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00218 K15400 - gmx:100794490 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00218 05 1087521 1089405 Bva05g00218 05 1087521 1089405 ECH