Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00217 ATGGACACTGTGAAGCAAACATGCAAGAAGGTATGGCTCCGCTGCAGGAGATCCCATGCAGTTGCCGCAGCTTCAAACTACCAATTATTACCTGAGAAGGACCCgaagcagaagaaaaacaagaaagctCGCGTAGTGGTTCCGCCGGGTTGCTTTTGTGTTGAAGTTGGAGCCGAGAGAGAAAGATTCCTAGTGAAGATAAAGCTTGCGAATCACCCATTGTTCAAGATGCTGCTCGACGATGCCGAGAAGGAATACGGTTTTCAAAACGACGGCCCCATACGGCTTCCTTGTCATGTTGATTTATTCTGTGATGCATTGGAAGAGATGGAGAGCCATATCATGCCTTTTGCAGGCTGCACCTTCCCTAAGGCAAACTCCTCAGTTTTCCACTCTCCATTATCTCGTCATCAGTCTTCTAACTCTCACCGTGCTAGTACTGGTTACGAGCTTTCCAGCGTGCATGCTTCCTACAGACCCATTTCTGGTTTTCATGTGTA 500 0.458 MDTVKQTCKKVWLRCRRSHAVAAASNYQLLPEKDPKQKKNKKARVVVPPGCFCVEVGAERERFLVKIKLANHPLFKMLLDDAEKEYGFQNDGPIRLPCHVDLFCDALEEMESHIMPFAGCTFPKANSSVFHSPLSRHQSSNSHRASTGYELSSVHASYRPISGFHV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00217 166 Pfam Auxin responsive protein 25 108 IPR003676 GO:0009733
Bva05g00217 166 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 112 IPR003676 GO:0009733
Bva05g00217 166 PANTHER SMALL AUXIN-UP RNA-RELATED 4 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00217 Bva-Chr5 1086267 1086767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00217 47 107 Calmodulin-binding Proteins AT4G34750 50.820 1.20e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00217 K14488 - cam:101489648 118.627