Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00209 ATGGGTTGCGTGCTCGGAACGCCCGCGGATGCCGGAGGCCGCCGGACGGATTCCGGAGCTCAGCACCGTGGTCGCAGCACCGGAGACAATGCCATCAGGGTTAAGAACGAGGGGACGGTGAAGGAGAGGCAAAGGGCTCGGCAAACCGGCGATTTACCCAGGTCTTTTCCGGCGCCGGAGCGCAGGAAACCTAGGCTTGATCCATGCGCTAAAACCCCACAGGGTTGGCCGTCTTGGTTGATGGCTGTGGCTGGCGAAGTAATCGGAGATTGGACTCCTCGTCGGGCCAACACATTCGAGAAGCTTGCTAAGATTGGGCAAGGTACTTATAGCAATGTATATAAAGCGAAAGACCTTCTTACTGGAAAGACAGTGGCTTTAAAGAAAGTTAGATTTGATAGTTTGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAGATTCTTGTTTTGAAGCGGCTTGATCACCCCAATGTCATTAAAATTGAAGGCTTGGTTACTTCGAGAATGTCATGTAGTCTTTACTTGGTGTTTGAGTATATGGAACACGATCTAGCTGGGCTTGCTGCTGGCCAGGGAGTTAAGTTCACTGAGCCTCAGGTCAAATGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCCGGGGTGTCTTGCACCGTGATATCAAGTGCTCCAATCTTCTTATCGACAATGAAGGAATCCTTAAAATAGCAGATTTTGGACTGGCGGCTTTTTTTGACCCTGAGCAAAAGCAGCCCATGACAAGCAGAGTTGTTACCCTTTGGTACCGGGCCCCTGAGCTTCTTCTCGGGGCTACATTCTATGGTGTTGGCATTGATCTTTGGAGTGCTGGATGCATTTTGGCTGAGCTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAACtgcacaaaatatttaaactatgTGGCTCTCCATCTGAGGAATATTGGAAGAAATATAGATTGCCAAATGCGACACTTTTTAAGCCACAGCAACCATACAAGCGTTGCATATCAGAAAACTTGAAGGATTTCCCTCCTTCTTCATTACCTCTAGTTGAATCTCTTCTTGCAATAGATCCTGATAATCGTGGCACTGCCTTAGCTGCTCTAAATAGTGAATTCTTTACCACTGAGCCCTATGCTTGTGAACCATCAAGCCTACCTAAATATCCTCCCAGCAAGGAACTGGATTTAAAACTGAAAGATGAAGCAGCGAGAAGGCAAAAGGTTGTAAGCGGGAAAGCTAATGCAGTTGATGGTGCAAGAAGAGGCAGAGCACGTGAGCGTGGTCGGGCCATTCCAGCCCCAGAAGCCAATGCAGAGATTCAGACAAACCTAGATAGGTGGAGAGTTGTGACCCATGCTAATGCAAAAAGCAAGAGCGAGAAATTCCCACCTCCTCATCAGGATGGAGGTGTTGGATATCCATTGGATGCATCGCACAAAGAACCTGTTTCATTTGGTGCCAGTGAGGCTTCTTCCTTTGGCTCCGCGATATTTAATTCAAAGCCTGTTAAAAGTCAAGCTGCTGCAGGAGCTCATAATCATAGAGGAAGGAAAACTAATAAAGCAGTGTCTTA 1604 0.4751 MGCVLGTPADAGGRRTDSGAQHRGRSTGDNAIRVKNEGTVKERQRARQTGDLPRSFPAPERRKPRLDPCAKTPQGWPSWLMAVAGEVIGDWTPRRANTFEKLAKIGQGTYSNVYKAKDLLTGKTVALKKVRFDSLEPESVKFMAREILVLKRLDHPNVIKIEGLVTSRMSCSLYLVFEYMEHDLAGLAAGQGVKFTEPQVKCYMKQLLSGLEHCHSRGVLHRDIKCSNLLIDNEGILKIADFGLAAFFDPEQKQPMTSRVVTLWYRAPELLLGATFYGVGIDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCISENLKDFPPSSLPLVESLLAIDPDNRGTALAALNSEFFTTEPYACEPSSLPKYPPSKELDLKLKDEAARRQKVVSGKANAVDGARRGRARERGRAIPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGGVGYPLDASHKEPVSFGASEASSFGSAIFNSKPVKSQAAAGAHNHRGRKTNKAVS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00209 534 MobiDBLite consensus disorder prediction 512 534 - -
Bva05g00209 534 SUPERFAMILY Protein kinase-like (PK-like) 93 388 IPR011009 -
Bva05g00209 534 MobiDBLite consensus disorder prediction 1 70 - -
Bva05g00209 534 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Bva05g00209 534 PANTHER CELL DIVISION PROTEIN KINASE 61 521 - -
Bva05g00209 534 ProSitePatterns Protein kinases ATP-binding region signature. 105 128 IPR017441 GO:0005524
Bva05g00209 534 MobiDBLite consensus disorder prediction 465 499 - -
Bva05g00209 534 Gene3D Phosphorylase Kinase; domain 1 86 181 - -
Bva05g00209 534 ProSiteProfiles Protein kinase domain profile. 99 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00209 534 CDD STKc_CDK9_like 99 383 - -
Bva05g00209 534 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 61 521 - -
Bva05g00209 534 Gene3D Transferase(Phosphotransferase) domain 1 182 423 - -
Bva05g00209 534 SMART serkin_6 99 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00209 534 MobiDBLite consensus disorder prediction 35 49 - -
Bva05g00209 534 Pfam Protein kinase domain 99 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00209 Bva-Chr5 1039525 1043744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00209 91 418 Core Cell Cycle Gene Families AT5G10270 51.282 1.11e-113 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bva05g00209 Pkinase 8.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00209 K08819 - gmx:100807756 851.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00209 05 1039525 1043744 Bva05g00209 05 1039525 1043744 ECH