Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00206 ATGAAAGTACCGGAGACCGATCCTATTAACCTCTCTAATcatcttctctcttctctgcTCGACGAAATCCCCGTCGTACATAATTTCAAAGGTAAATGGTCTCTGATCAGAGCCAAACTCACCGATCTTCAAACTCAACTCACCGATTTCTCCGCCGAGTTTCCCAATTCCTCTTCTAACCCTCTCTCCCTTGACCTTCTTCGTTCCGTTTCCCACACCCTCAACGAGGCCCTTTTGCTCGCCAAAGGTTGTTCCTCCTCTAATTTATCCCAGGGTAAGCTCAAGACTCAGAGCGATATTGATTCCGTTTTAGCTAAGTTGGATCGTCATGTTAAGGATTGTGAAATTCTCTTTAAAAGTGGCGTTCTGCAAGACGGCGCCGTTTCTAGCTCGTCTAAGAGGGAGGCCGTGCTATCCGAATCCAGGAACTTGATGACTCGTTTGCAAATTGGCTCCGCCGATTCAAGAATGTCGGCGATGGACTCCTTGTTGGATTTGTTCCTGGAGGATGATAAGAATGTTATGATAGCCGTGGCCCAGGGTGTGGTACCAGTGCTTGTCCGCTTGCTGGATTCTACCTCCTCCGAGATGAAAGAGAAGACTGTTGCTGCCATCTCCAGGGTTTCTATGGTGGATAGTAGCAAGCATGTTCTAATAGCTGAGGGTTTGTTACTTCTGAATAATTTGCTTCGGGTCCTTGATTCGGGAAGTGGCTTTGCCAAGGAGAAAGCTTGTATTGCGCTACAAGCATTGAGTTTTTCGAAAGAAAATGCCAGGTCAATTGGTTCTAGAGGTGGAATTTCATCTCTATTGGAGATTTGCCAAACCGGCACACCTGGTTCCCAAGCTTCCGCTGCGGGGGTTTTGAGAAATCTCGCAGTCTTTGGTGAAATTAGAGATAATTTCATCGAGGAAAATGCAATCTTTGTTCTTTTGGGGCTTGCCTCTTCAGGAACTATTTCAGCCCAGGAAAATGCAATTGGTTGTTTGtctaatttgatttctaatgATGAAAGTTTGAAGCTTTTGATTGTTAAGGAAGGAGGAATTCGGTGTTTGAAGAATTTCTGGGACTCTGCTCCCTCTATTCAGAGTCTTGAAGTTGCTGTTGAGTTGTTGAGACACTTGGCTTCTAATCCACCAATTGCTGAAGTTCTTGTTTCTGAGGGCTTCATACTCCGACTCGTTGGCCTGTTGAATTGTGGGGTACTGGGTGTGAGAACTGCTGCAGCTCGAGCCGTGTATGCTTTATCGTTCTGCACGAAGACGAGGAAAGAGATGGGTGAATGTGGATGCATTACTCCATTGATCAAGATGTTGGATGGTAAGGCTGTAGACGAAAAAGAAGCGGCCGCAAAGGCGTTGTCAGTGCTCATGCTATATGCCGGTAATAGAAGGATTTTCCGTAAAGATGAGAGGGGTATAGTAAGTGCAGTCCAGCTTCTGGATCCTTCAATTCAGAAGTTGGATAAGAAATACCCCGTCTCCATGTTGGTCTCACTTGTGCATTCAAAGAAATGTAGGAAACAAATGATAGCAGCTGGTGCTACTGTACATATACAAAAACTTATTGAGATGGATGTTGAGGGGTCCAAGAAACTCTTGGAGAGCCTTGGTCGTGGTAAGATATGGGGAGTTTTTGCACGACCCTA 1652 0.4455 MKVPETDPINLSNHLLSSLLDEIPVVHNFKGKWSLIRAKLTDLQTQLTDFSAEFPNSSSNPLSLDLLRSVSHTLNEALLLAKGCSSSNLSQGKLKTQSDIDSVLAKLDRHVKDCEILFKSGVLQDGAVSSSSKREAVLSESRNLMTRLQIGSADSRMSAMDSLLDLFLEDDKNVMIAVAQGVVPVLVRLLDSTSSEMKEKTVAAISRVSMVDSSKHVLIAEGLLLLNNLLRVLDSGSGFAKEKACIALQALSFSKENARSIGSRGGISSLLEICQTGTPGSQASAAGVLRNLAVFGEIRDNFIEENAIFVLLGLASSGTISAQENAIGCLSNLISNDESLKLLIVKEGGIRCLKNFWDSAPSIQSLEVAVELLRHLASNPPIAEVLVSEGFILRLVGLLNCGVLGVRTAAARAVYALSFCTKTRKEMGECGCITPLIKMLDGKAVDEKEAAAKALSVLMLYAGNRRIFRKDERGIVSAVQLLDPSIQKLDKKYPVSMLVSLVHSKKCRKQMIAAGATVHIQKLIEMDVEGSKKLLESLGRGKIWGVFARP 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00206 550 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 2 548 - -
Bva05g00206 550 SUPERFAMILY ARM repeat 143 520 IPR016024 -
Bva05g00206 550 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Bva05g00206 550 Gene3D - 89 384 IPR011989 -
Bva05g00206 550 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 2 548 - -
Bva05g00206 550 Gene3D - 385 534 IPR011989 -
Bva05g00206 550 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Bva05g00206 550 SMART arm_5 420 460 IPR000225 GO:0005515
Bva05g00206 550 SMART arm_5 170 210 IPR000225 GO:0005515
Bva05g00206 550 SMART arm_5 295 335 IPR000225 GO:0005515
Bva05g00206 550 SMART arm_5 336 378 IPR000225 GO:0005515
Bva05g00206 550 SMART arm_5 379 419 IPR000225 GO:0005515
Bva05g00206 550 SMART arm_5 254 294 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00206 Bva-Chr5 1030275 1032334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00206 127 466 U-box Gene Family AT2G23140 26.801 2.26e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00206 - - zju:107418090 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01551 06 11108145 11110315 Bva05g00206 05 1030275 1032334 ECH
Bva05g00206 05 1030275 1032334 Bva05g00206 05 1030275 1032334 ECH