Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00201 ATGGCTCCCTCCGAGGAATCTCGCAGATCTCTTGTCCCTGAATATCTCTACTCTTCTCCATCATCATCGCACAgattattcaatttcaatacACTATTGGTGAAGCCCAATCAAAATCATGCTAGGGTGACACCATCAAATTATTCATCATCGCCAGCAGGAGGGAGGCTTAtgatccctgcacctagcgaGAAGATCCAGATGTTTTCTCCGGCTTACTACGCCGCATGTACTGCCGGTGGAATCTTCAGCTGCGGCCTAACCCACATGGCCGTCACTCCTCTCGATCTCGTCAAGTGCAACATGCAGATTGACCCAGCAAAGTATAAGAGCATCGCATCAGGATTTGGAATTTTACTGAAGGAGCAGGGTGTCAAAGGTTTCTTCAGGGGCTGGGTGCCGACTTTACTGGGCTACAGTGCTCAGGGAGCGTGCAAGTTTGGATTTTACGAGTTCTTCAAGAAGTATTACTCAGACATTGCCGGGCCCGAGTTTGCAGCCAAGTACAAAACTTTGATATATCTTGCGGGTTCAGCTTCAGCAGAGATCATTGCTGATGTTGCCCTTTGCCCCATGGAGGCAGTCAAAGTTCGTGTACAAACTCAGCCTGGCTTTGCTAGAGGCTTGGCAGATGGATTCCCCAAGTTTGTTAAGGCTGAGGGTGCTCTTGGCTTGTACAAAGGACTTGTTCCTCTTTGGGGGCGTCAGATTCCATATACAATGATgaaatttgcttcttttgaGACTATTGTGGAGATGCTGTACAAACACGCCATCCCAACCCCTAAAGAACAGTGCAGTAAAACTCTGCAGCTCGGAGTCAGTTTTGCTGGGGGCTATGTGGCGGGTGTATTATGTGCTGTGGTCTCCCACCCCGCTGAcaatcttgtttcttttctcaacAATGCCAAGGGAGCCACCGTTGGTGATGCTGTGAAAAAGCTGGGGCTATGGGGTCTGTTTACTCGCGGCCTTCCTCTTCGTATAGTTATGATTGGAACACTTACTGGAGCCCAGTGGGGAATCTATGATGCTTTCAAAGTATTTGTAGGGCTGCCTACTACTGGCGGTGCTGCTCTTCCGCCTGCTGCAGCAAAGGCATG 1103 0.4651 MAPSEESRRSLVPEYLYSSPSSSHRLFNFNTLLVKPNQNHARVTPSNYSSSPAGGRLMIPAPSEKIQMFSPAYYAACTAGGIFSCGLTHMAVTPLDLVKCNMQIDPAKYKSIASGFGILLKEQGVKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEFAAKYKTLIYLAGSASAEIIADVALCPMEAVKVRVQTQPGFARGLADGFPKFVKAEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMLYKHAIPTPKEQCSKTLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGAALPPAAAKA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00201 367 Gene3D Mitochondrial carrier domain 72 350 IPR023395 -
Bva05g00201 367 Pfam Mitochondrial carrier protein 74 158 IPR018108 -
Bva05g00201 367 Pfam Mitochondrial carrier protein 173 257 IPR018108 -
Bva05g00201 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 169 253 IPR018108 -
Bva05g00201 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 270 349 IPR018108 -
Bva05g00201 367 SUPERFAMILY Mitochondrial carrier 73 345 IPR023395 -
Bva05g00201 367 PANTHER PHOSPHATE TRANSPORTER 1 365 - -
Bva05g00201 367 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 365 IPR044677 GO:0005315|GO:1990547
Bva05g00201 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 156 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00201 Bva-Chr5 1002203 1004630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00201 5 365 Chloroplast and Mitochondria Gene Families AT5G14040 77.027 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00201 K15102 - twl:120004074 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01557 06 11143375 11145829 Bva05g00201 05 1002203 1004630 ECH
Bva05g00201 05 1002203 1004630 Bva05g00201 05 1002203 1004630 ECH