Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00197 ATGGCAACAGAGCAAAAGCGCGACCCTGCTGTTGCACTCTCCTACTCCCTTCAGGACAGAGACGAAGATAACGAATTCAACGTAGGATCGGAAGAGCCTGAGGCCCCATTGCCTCTCACCGCATCTTCCAGGGTATTGTATATGTTGGGAGACATCACGGCAGGGCCTGCGTTTAGGTTCACGCAATGGCTCGAATTGGTTCGTAAACGCACTGCCAAATATCGCTCCTCTGGCTTCCCCCACCGCCCTTCAAGGCTGCCTGTTACCATGCCCTCTAGTGTGGGAGAATCAACAGAGGATGCAAAATGTGACCACCTTCCTGAGCAAACAATAGAAATCAGTTTGTGGGAAAGACTTGGTAAAGCTGCAACATTAGACATTGAATCAAGTTCCTTTTCTTGGGACATGCTTTCTTCACTGCACCATACTGAACACAGTAGCAGCAATGAACATTCTGAGGATGACATGAACAGAGCTCTTGAGGTAACTGTAAATTCCGGGGGAGTTGTCTTCTTTGCCTTTTTCAATCACCCTGGGAATAGCGAGGGTTTCCCAAAGGGGGCAGCAGCTGtcataaaaatatcatcatcAAGAATGGCAACTCAATCAGAGCGCCTTGGTTATGAATTTGCCAAGTGGTTGGGAGTTCGAACTCCACAGGGTAGAGTCATTCACAATACAAGTCCAGAGTGGCTCCAAATAAAAGAAGCGACAGAGAAAGCTAGAGATGCAGCAAATTCTGAAGGAGATGAAATTGGTGAAATGACATGTTCAGAGCTTTTGGAAGCACTTGAACTTAGCCGATGCCTATTTTTTATGAGTTATATGCATGGTTCACCCTTACTTGAAAGTTCAAGTGCATTTGAGTCACAGGAGTCTTCAGAAAGAACATCAGCAGCTCTTGGCAGGGTATTGATGCTAGATCTTGTCATCAGAAATGAAGATAGGCTCCCTTGTCGTGAACTTAGATGGCGTGGAAATTCTGCTAATTTGTTGTTGGCTGAAAAGATGACCTCAGCAAATACAGAGACACTGGAAGAAGCCTTCGATTCTGTAATTAATAGATATAGACCAAGGGTACTCAGAGCacttctaaaagaaagaaggtcAATTTCCGTAGATAGTAGATATAGTAGTTTTGGCTCACATAATCCTGGATTAGTATCACAGGCCTCTGATCTTTCAGAGATCTCGGAATCACCAAGATCAAGCTCAATGAGCCTTAAAAGTGAAACATCAGATGAATGCACTGATGTTAACATAGTGGCTATTGATTCGGGTGTGCCCCGCCGACCTCCTGCTGGAAAACGTGCAAACGATCATGTCAGTTATCCTAAGTTGGTTGAGTTACTACTCAATAGTTCTGAGTATGCCTCTAACTTGTTACATGATATAACTGGAGGGAAATTAGGATGTTCACTGGAAGACATGAATACGACAACTGATGTACGCTCTAAGGACGTTGCATCTGTAGTTCATGAGTTCCGAAGTGGATTCCGTGCTGCTCTTAGGGATCTGCAGGGATTCCATATATTTATACTCACACTTCACCAGAAGCTTGATAGCTTACTACGAACATTTATGAACATTATAAGCAAAATATCAACGGGGGAGGCTGACAAAGAAGATTCAGTGATTCCTGACTCACCTTCCCAGGCTACTGGTAGTGTTAACGATAACCATCGAGATTTTAGTGATTCAGAATCACAAAGAACTGCTCCAAGGGCTTCGCCTTCCGGCAGTAAAGAAAGCTCAGattctccttctcccatgACAAGAGAAAGTTGGCATGGAAAATTCTATAAAGGAAGCGGGGAGCCACCTCGTAGTCTTCGCTTGACAGCAAAACTCCGTGACTTCCAAAAATTTGCCAAGATTGACGCAGAATCAAGCAAGGAGTTGGAACAATGGAATGAAATGCTTAAAAATGATGCCATCAAACTATGCCAGGAGAACAACTTTAATACAGGATTTTTTGAGGGTAGTGATAATAACAGTGTTGTTGATGCTTATGAACTGAAGGTGAGACTTGAGCATATACTTGAGAGGATTGCATTGATATCTGAGGCTGCTAACACAGAGAAGCCTTCTGCTGTAACAAATAGTCTGTTCATTGGTGGAGCATTGGCTGCAAGATCTATATACACACTGCAGAACTTGGGAATCACACatattttgtgtttgtgtgCCAATGAAATTGGGCAGTCAGATTCTCAGTTTCCTGATCTATTTGagtacaaaaatttctttGTATGTGACAACGAAGATACTAACATCAACAGCATATTTGAAGAAGCTTgtgattttattgattatgttGAACAAAGAGGACAGAGAGTTTTAGTTCATTGCTTTGAAGGAAAAAGCAGAAGTGCCACGTTGGTCCTTGCTTACTTAATGCTTAGGAAGAACTTCACTCTATTAAAAGCATGGAATGCTCTGAAACGAGTTCATCGTCGAGCACAGCCCAATGATGGTTTTGCAAAGATCTTATTGGATCTAGATCAGAAACTGCATGGGAAGGTTTCCATGGAATGGCAGCAACGGAAACCCATGATGAAAGTCTGCCCCATTTGTGGGAAGAATGCTGGCCTCAGCAGCAGCTCACTTAAGCTCCATCTGCAGAAATCACATAAGAAGCTATCATCGGGGAGCGTAGACAGTGCCATGACAATGGAGATTCAAAAGGCTTTAATGGCTCTGAAGATTAATCGAGGACAATCTCATTCAGTTATGAATGAGTA 2744 0.418 MEWQQRKPMMKVCPICGKNAGLSSSSLKLHLQKSHKKLSSGSVDSAMTMEIQKALMALKINRGQSHSVMNE 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00197 71 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 1 67 IPR035010 GO:0004721|GO:0009737|GO:0043622
Bva05g00197 71 PANTHER DUAL SPECIFICITY PHOSPHATASE FAMILY PROTEIN 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00197 Bva-Chr5 977744 985348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00197 1 64 Protein tyrosine phosphatase (PTP) family AT5G23720 84.375 2.25e-25 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00197 K14165 - tcc:18605188 107.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00197 05 977744 985348 Bva05g00197 05 977744 985348 ECH