Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00195 atgcCTGCAAAGAATTTGATGGCCAAACGCCGGCGGCGGAAGAAGCTCAATGATCGGTTATATATGCTGAGGGCTTCAATCCTTGGAGACGCAATCGAGTATTTGAAGGAACTACTGCAGAGGATCAATAACGAATTGGAGACATCACCTGCTGACTCCCCTATCACATTCACACCCGTCTCAAGCTTCCATCCATCGTCAGTAGCCAGCAGCATAAAGGAAGAACTTTGCCCCACCACCACATTGCCATGCCAAGCCCTGCAAGGACCTGGTCTCCGTTTCCTCACTGCCATGAAGACTTTGGATAACCTTGGGCTAGACATCCAGCAAGCTGATATTAGCTGTTTGAATGGATTTGCTATGGATATTTTTCGAGCTGAGCAATGCATGGAAGGCCAGGATGTCCACCCTGAGCAAATCAAAGCTTTGCTCTTGGATTCGGTTGGCTTCCATAGCAATAGCATGATCTA 470 0.4766 MPAKNLMAKRRRRKKLNDRLYMLRASILGDAIEYLKELLQRINNELETSPADSPITFTPVSSFHPSSVASSIKEELCPTTTLPCQALQGPGLRFLTAMKTLDNLGLDIQQADISCLNGFAMDIFRAEQCMEGQDVHPEQIKALLLDSVGFHSNSMI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00195 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 84 - -
Bva05g00195 156 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 90 152 - -
Bva05g00195 156 PANTHER BHLH TRANSCRIPTIONAL FACTOR 1 84 - -
Bva05g00195 156 PANTHER BHLH TRANSCRIPTIONAL FACTOR 90 152 - -
Bva05g00195 156 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 5 44 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00195 Bva-Chr5 966350 967685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00195 1 127 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 52.381 1.15e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00195 - - csv:101206422 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01563 06 11180699 11183833 Bva05g00195 05 966350 967685 ECH
Bva05g00195 05 966350 967685 Bva05g00195 05 966350 967685 ECH