Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00194 ATGGCATCATCAGAGGTCTCAATCAAGGGAAATTGTGTGAACGGAAATGGGGAAAGCTATTCTTCTGGCTACAACAACCATAACGATGCTAGAAACGCTACAGAGGGTCAGAATGCTCATTCAATAATCATGAAAGACGCGGAAGCTGCGCTTTACAGGGAGCTATGGCATGCCTGTGCTGGTCCCCTTGTCACAGTACCCCGGGAAGGAGAACGGGTCTTCTATTTTCCTCAGGGACATATCGAGCAGGTGGAGGCGTCCACGAATCAGGTGGCGGACCAGCACATGCCCGTATACGATCTCCCATCCAAAATCCTTTGTCGGGTGATCAACGTGATGCTTAAGGCCGAGCCGGATACCGACGAGGTGTTTGCCCAGGTGACCTTGCTTCCGGAATCTAATCAAGATGAGAACGCCGTGGAGAAAGAGCCACAACCGCCTCCACCCCCACGATTTCACGTGCACTCGTTCTGTAAAACTCTAACGGCCTCAGATACGAGTACCCACGGTGGGTTTTCAGTGCTTAGACGACATGCTGATGAATGCCTTCCTCCGCTGGACATGTCAAAGCAGCCACCTACCCAGGAATTGGTGGCGAAAGATCTGCACGCCAACGAGTGGAGATTCAGGCATATCTTTCGGGGTCAACCGCGCAGGCACTTGCTACAAAGTGGTTGGAGTGTTTTTGTCAGCTCCAAGAGGCTTGTAGCTGGGGAcgcatttatatttttgagGGGTGAGAATGGGGAACTTCGTGTTGGTGTCAGGCGTGCAATGAGACAGCAGGGTAACGTTCCATCCTCGGTCATCTCCAGTCACAGCATGCATCTTGGGGTCCTTGCAACTGCTTTGCATGCCATCTCGACAGGGACCATCTTCACTGTTTATTACAAGCCTAGGACGAGTCCGGCTGAATTTATTGTTCCATATGAACAATATATGGAGTCTCTTAAAAGTAACTATTCCATAGGAATGCGGTTCAAAATGAGGTTTGAAGGTGAAGAGGCTCCCGAGCAGAGGTTTACTGGTACCATTGTTGGAATTGAAGATGCTGACCCCAAAAGGTGGCCTGAATCCAAATGGAGATGCCTTAAGGTGCGATGGGATGAAACATCTAACATACCTCGTCCTGAGAGAGTTTCTCCATGGAAAATAGAGCCTGCCCTTGCTCCTCCTGCTATGAATCCTCTTCCGATGCCCAGACCTAAAAGGCCTCGATCAAATGCGGTTCCATCTTCCCCTGACTCCTCTGTTCTTACTCGTGAAGCCTCTTCTAAAGTAAGTGTAGACCCTTCGCCAGCAGGTGGGTTTCCAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTGCAGAGAGTAACGAGTCAGATACTGCTCTAGATGAtgaaaagattgatgtaatttctACTTCAAGGAGGTATGGATCCGATAGCTGGATGTCAATGGGGAGGCATGAGCCAACATATTCTGATCTGCTGTCAGGCTTTGGAGTTGGTGGAGATCCTTCTCATCCGTCCTTCATTGATCAAACTGCTCCTTCGGTTAATCCTGCTAGAAAACATTCGGTGGATCATGAAGGAAAGTTTAATGTGCTAGCCAGTCCGTGGCCTGTAATTCCCTCTAGTCTATCACTTAATCTCTTGGACTCTAACGTGAAAAGTTCTGCACAAGGTGGTGATATAACGTACCAAGGTAGAGGGACTGTGAGGTATGGTGCATTAAGGGATTATACTGTTCTTCATGGTCATAAAGTTGAGTATTCGCATGGAAGCTTGTTGATGCTGCCACCACTGCCAACTCAATATGAGAGTGCCCGATCAAGAGACCCAATGACCAAACAAATGCCTGCAAAGACTAGCGAGGCTGTGAAACCAAGAGATGGGGACTGTAAGCTGTTTGGCATCTCACTTATCAGTAACCCTGTTACGCCAGACCTTTGTGTATCACAAAGAAGTGTAGCAAGTGAATCCGCTGGGCAAGCACATCTCACGTCAAACCAACCTCATACTTCTGAATCAGCAGATGTTATAGTTGCTATTGATGACAACGACAAGCCATTGAACACCTGTCATACACATCCGAAAGATGTTCAAGCCAAACAGCCTAGTGGATCTACTAGGAGTTGCACTAAAgtTCACAAGAAGGGGATTGCACTAGGCAGGTCAGTGGACCTTACAAAGTTCAGCAACTACGATGAATTAGTCTCTGAATTGGATCAGCTATTTGAATTTGGAGGCGAACTGATGTTTCCTTCAAAAGAATGGCTTATTGTCTATACTGATAATGAGGGGGACATGATGCTTGTGGGGGATGATCCATGGCAGGAGTTCTGTGCTATGGTACGCAAAATTTATATCTACCCCAAAGAGGAGATTCAGAAAATGAGCCCTGCTGCATCATGCAGCAGCTTCGACGCCCGAAAATTCCTAGATTTGGTTTCCGTATCTTCCAGGTTCCGGGCTGTAAAAGGGTCTACCATAAAGGCCATCCTGTTCCTGATGAATATGGATGGCAGGAACGAGTATCCATCCAATTTTGAGCGCATCCTGGAATA 2564 0.4707 MASSEVSIKGNCVNGNGESYSSGYNNHNDARNATEGQNAHSIIMKDAEAALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVADQHMPVYDLPSKILCRVINVMLKAEPDTDEVFAQVTLLPESNQDENAVEKEPQPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATALHAISTGTIFTVYYKPRTSPAEFIVPYEQYMESLKSNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWPESKWRCLKVRWDETSNIPRPERVSPWKIEPALAPPAMNPLPMPRPKRPRSNAVPSSPDSSVLTREASSKVSVDPSPAGGFPRVLQGQEFSTLRGNFAESNESDTALDDEKIDVISTSRRYGSDSWMSMGRHEPTYSDLLSGFGVGGDPSHPSFIDQTAPSVNPARKHSVDHEGKFNVLASPWPVIPSSLSLNLLDSNVKSSAQGGDITYQGRGTVRYGALRDYTVLHGHKVEYSHGSLLMLPPLPTQYESARSRDPMTKQMPAKTSEAVKPRDGDCKLFGISLISNPVTPDLCVSQRSVASESAGQAHLTSNQPHTSESADVIVAIDDNDKPLNTCHTHPKDVQAKQPSGSTRSCTKVHKKGIALGRSVDLTKFSNYDELVSELDQLFEFGGELMFPSKEWLIVYTDNEGDMMLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPAASCSSFDARKFLDLVSVSSRFRAVKGSTIKAILFLMNMDGRNEYPSNFERILE 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00194 854 MobiDBLite consensus disorder prediction 389 407 - -
Bva05g00194 854 MobiDBLite consensus disorder prediction 409 427 - -
Bva05g00194 854 Gene3D - 320 390 - -
Bva05g00194 854 ProSiteProfiles B3 DNA-binding domain profile. 157 259 IPR003340 GO:0003677
Bva05g00194 854 CDD B3_DNA 155 257 IPR003340 GO:0003677
Bva05g00194 854 Gene3D - 154 259 IPR015300 -
Bva05g00194 854 Pfam B3 DNA binding domain 157 258 IPR003340 GO:0003677
Bva05g00194 854 SUPERFAMILY DNA-binding pseudobarrel domain 153 286 IPR015300 -
Bva05g00194 854 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 36 811 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva05g00194 854 Gene3D - 706 799 - -
Bva05g00194 854 SMART B3_2 157 259 IPR003340 GO:0003677
Bva05g00194 854 PANTHER AUXIN RESPONSE FACTOR 2 36 811 - -
Bva05g00194 854 MobiDBLite consensus disorder prediction 387 439 - -
Bva05g00194 854 SUPERFAMILY CAD & PB1 domains 709 787 - -
Bva05g00194 854 ProSiteProfiles PB1 domain profile. 710 803 IPR000270 GO:0005515
Bva05g00194 854 Pfam Auxin response factor 283 365 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva05g00194 854 Pfam AUX/IAA family 754 798 IPR033389 -
Bva05g00194 854 MobiDBLite consensus disorder prediction 607 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00194 Bva-Chr5 960330 965420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00194 1 806 B3 DNA Binding Superfamily AT5G62000 66.031 0.0 1093
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva05g00194 B3 2.3e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00194 - - gmx:100797082 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00194 05 960330 965420 Bva05g00194 05 960330 965420 ECH