Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00193 ATGCATTTTGCAAAACTCGATGATTCGCCTATGTTCCGGCAACAGCTTCAATGCTTGGAAGAAAGTGCAGAGTCCTTAAAGACGAGATGCTTGAAGTACTACAAAGCATGTCGCAAGTACACGGAAGGGCTTGGCGAGGGATATGATGGAGATATTGCATTTGCAAATGCCCTTGAAAGTTTTGGAGGAGGGCATAGTGATCCTCTTTTTGTTGCTTTGGGAGGACCGGTTATGACCAAATTCACAATTGCTTTTAGAGAAATTGGTACATACAAGGAAGTTCTTCGGTCACAGGTAGAGAACATGCTGAGTGATCGATTGCTACAATATATCAATGTCGACATTCAAGAAGTCAAGGAAGCTAGGAAGCGATTCGACAAGGCTTCCCTTGTATATGACCAGGCACGTGATAAGTTTATGTCATTGAGAAAGAGCACGAAGATTGATATTACCACTGTCATAGAAGAGGAATTGCACAATGCAAGATCCTCATTTGAGGAAGCTCGCTTCAATCTGGTCAGTGCCCTTAATAATGTTGAGGCGAAGaagagatttgaatttttggaggCTGTCACTGTAGTTATGGATGCCCATCTTCGATATTTTCAACAGgGATATCAGCTATTACATCAGCTGGAACCTTTCATTGCCGAGGTTCTAGACTATGCACAGCAGTCAAGAGAAAGTTCCAATAAGGAGCAGAATTCCCTCAATGAAAGAATGCAAGATTATAGAAGACAAGCTAATCAAGAAAGTAGATTGTCCTTGAATGGCCCTGCTGGAGACTGTGCGCAGCATTTTCCTAGAATATCAAATGAAGTGGTAGATGCAGTAATGGAATCTGCTTCAAATGGAAAGGTTCAAATTATTCGACAAGGGTATCTTTCCAAACGGTCCTCCAATCTGAGGGCTGACTGGAAAAGAAGGTATTTTGTTCTTGATAGTCGAGGGATGCTGTACTACTATCGCAAACCATGGAACTGGTCATATGGTGGCAGTCAACCATCTGCATCAAGGAACAGTGCCACAGAAAATTCATCTGGTCTCCTGAGCCGGTTGCTTTCTTCCCATTACCATGGAGGTGTCCATGATGAAAGAACTGTAGCTCGTCATGCAGTGAACCTGCTTACATCAACAATTAAGGCCGATGCTGATCAATCGGATTTAAGATTCTGCTTCAGGATTATTTCACCATCGAAAAGCTATACATTGCAGGCAGAAAATGCATTGGACCAGATGGCTTGGATTGAAAAGATAACTGGAGTAATTGCCTCCTTGTTGAGTGTCCAGACAATAGAAACGCCTCCCTCAGGTGAACCAGAAAGCGGTGACTTTCAGTCTGCTGGAAAGACTATGTTGGCAAATTCTCCAGGTTATAATCAAGTCGTGACTCAGGAACATGCATCGAAGAATTTAACTTCTAATAACcacttaaaaatatcaaaaagttTGCAGTGCCATAGACAGAatgtaaaaagtgaaaagccaATCGATGTTCTTAGAAGAGTATGCGGGAATGACAAATGTGCTGATTGTGGTAACCCTGAACCAGACTGGGCATCCCTAAACCTTGGGATTCTTATATGCATCGAATGTTCTGGTGTTCATCGTAATCTCGGTGTACATATATCAAAGGTAAGATCCTTGACACTTGATGTGAAAGTCTGGGACCCCTTTGTCTTAACCATGTTTCAGTCACTGGGCAATCTCTTCGCCAACTCTGTTTGGGAAGAGCTTTTGCATTCAACAAGCACCTTGCAAACTGATGACACGCCTGTTTGTTCATCCAAGGCCAACGAAAACAAGCTATTTCATGGGAAGAAACCAGAATATGATGATCCTATTGCATTGAAGGAGAAGTTCATTCATGCAAAGTATTCGGAAAAACTCTTTGTTCGCCATATAAAGACAGAGCAGCGTCTCCTTTCAGTGGCACAAGAATTGTGGGAAAGTGTTCGTACCAATGACAAGAAAGTAGTATACCAGCATATTGTGAGGTCAAATGTGGATGTCAATGCTATCAGCGGTCAAGCATCACATGCACAGGGTGAATCCCTCTACATGCCTTCTTCAAGTAATTCAGACTCGTCATGTAAAAGTGAAAATCAGTCAATGGAAAACATACACGATACTTGTAGTGTGCTTCACCTGGCATGTCTAACTGCTGACGTTGGTATGGTGGAGCTGCTGCTACAATATGGTGCAGATATTAATGCTCCTGATTCCAGAGGTCGGACGCCACTGCATTATTGTATTATTGGAAGGAAGACCGCTGAAGCCAGAGTGCTTCTTATGAGGGGAGCCAATGCAAATGCAGTAGATAGTGAAGGTAATACTCCTCTTAAGCTTGCGTACGATTTAGGTTCTACTGGCAACGATATTGTCGCACTTTTGATAGATGCACACAGATG 2411 0.4177 MHFAKLDDSPMFRQQLQCLEESAESLKTRCLKYYKACRKYTEGLGEGYDGDIAFANALESFGGGHSDPLFVALGGPVMTKFTIAFREIGTYKEVLRSQVENMLSDRLLQYINVDIQEVKEARKRFDKASLVYDQARDKFMSLRKSTKIDITTVIEEELHNARSSFEEARFNLVSALNNVEAKKRFEFLEAVTVVMDAHLRYFQQGYQLLHQLEPFIAEVLDYAQQSRESSNKEQNSLNERMQDYRRQANQESRLSLNGPAGDCAQHFPRISNEVVDAVMESASNGKVQIIRQGYLSKRSSNLRADWKRRYFVLDSRGMLYYYRKPWNWSYGGSQPSASRNSATENSSGLLSRLLSSHYHGGVHDERTVARHAVNLLTSTIKADADQSDLRFCFRIISPSKSYTLQAENALDQMAWIEKITGVIASLLSVQTIETPPSGEPESGDFQSAGKTMLANSPGYNQVVTQEHASKNLTSNNHLKISKSLQCHRQNVKSEKPIDVLRRVCGNDKCADCGNPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDPFVLTMFQSLGNLFANSVWEELLHSTSTLQTDDTPVCSSKANENKLFHGKKPEYDDPIALKEKFIHAKYSEKLFVRHIKTEQRLLSVAQELWESVRTNDKKVVYQHIVRSNVDVNAISGQASHAQGESLYMPSSSNSDSSCKSENQSMENIHDTCSVLHLACLTADVGMVELLLQYGADINAPDSRGRTPLHYCIIGRKTAEARVLLMRGANANAVDSEGNTPLKLAYDLGSTGNDIVALLIDAHR 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00193 803 SUPERFAMILY PH domain-like 289 428 - -
Bva05g00193 803 CDD BAR_SFC_plant 15 215 IPR035670 -
Bva05g00193 803 ProSiteProfiles ARF GTPase-activating proteins domain profile. 494 639 IPR001164 GO:0005096
Bva05g00193 803 SUPERFAMILY ArfGap/RecO-like zinc finger 494 634 IPR037278 -
Bva05g00193 803 Gene3D Arf GTPase activating protein 474 636 IPR038508 -
Bva05g00193 803 ProSiteProfiles Ankyrin repeat profile. 710 742 IPR002110 GO:0005515
Bva05g00193 803 Pfam PH domain 290 423 IPR001849 -
Bva05g00193 803 Coils Coil 227 254 - -
Bva05g00193 803 Gene3D - 281 436 IPR011993 -
Bva05g00193 803 ProSiteProfiles Ankyrin repeat region circular profile. 743 774 - -
Bva05g00193 803 Pfam BAR domain of APPL family 6 235 - -
Bva05g00193 803 ProSiteProfiles PH domain profile. 288 424 IPR001849 -
Bva05g00193 803 SMART 5bar 2 218 IPR004148 GO:0005515|GO:0005737
Bva05g00193 803 MobiDBLite consensus disorder prediction 682 702 - -
Bva05g00193 803 PANTHER CENTAURIN/ARF 1 801 IPR045258 GO:0005096
Bva05g00193 803 SMART PH_update 289 426 IPR001849 -
Bva05g00193 803 Coils Coil 118 138 - -
Bva05g00193 803 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD1 1 801 - -
Bva05g00193 803 SUPERFAMILY Ankyrin repeat 709 800 IPR036770 -
Bva05g00193 803 Gene3D - 637 803 IPR036770 -
Bva05g00193 803 PRINTS HIV Rev interacting protein signature 506 525 IPR001164 GO:0005096
Bva05g00193 803 PRINTS HIV Rev interacting protein signature 525 542 IPR001164 GO:0005096
Bva05g00193 803 PRINTS HIV Rev interacting protein signature 548 569 IPR001164 GO:0005096
Bva05g00193 803 ProSiteProfiles Ankyrin repeat profile. 743 775 IPR002110 GO:0005515
Bva05g00193 803 Pfam Ankyrin repeats (3 copies) 715 800 IPR002110 GO:0005515
Bva05g00193 803 SUPERFAMILY BAR/IMD domain-like 6 311 IPR027267 -
Bva05g00193 803 CDD PH_ACAP 291 428 - -
Bva05g00193 803 ProSiteProfiles Ankyrin repeat region circular profile. 710 741 - -
Bva05g00193 803 SMART ANK_2a 710 739 IPR002110 GO:0005515
Bva05g00193 803 SMART ANK_2a 743 772 IPR002110 GO:0005515
Bva05g00193 803 CDD ArfGap 497 626 - -
Bva05g00193 803 SMART arf_gap_3 494 639 IPR001164 GO:0005096
Bva05g00193 803 Gene3D Arfaptin homology (AH) domain/BAR domain 4 251 IPR027267 -
Bva05g00193 803 Pfam Putative GTPase activating protein for Arf 497 633 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00193 Bva-Chr5 940398 950024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00193 506 644 C2H2 Transcription Factor Family AT4G21160 38.571 3.36e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00193 K12489 - gmx:100792517 1080.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g01566 06 11200728 11211265 Bva05g00193 05 940398 950024 ECH
Bva05g00193 05 940398 950024 Bva05g00193 05 940398 950024 ECH