Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00163 ATGATTAGGGTAATTGGCCAGCAGGAAGAAAACCAAAGTCAACATTCTTCCAGCATTTCCATGGAAGAGGATTCAAAAGATGAAGTGACTGTTAAAGCTGACCCTTTACTTATACCAGAAATTAAGAAGAGAAAGCGCCTTAGCCTTACTGAGCTAAGAGAGATAAAAGCAGAATTGGGTGGGAAGGAAAGGCAAAGTTGTAGTAAGCTTAAGATAAAGAAGCATGGTAGTACTGACAGATGGTCAACTGAGAGGTATGAGCTGGCTGAGAAAAGCATGTGGGAGGTCTTAAAGGCTGAAGGCGCAACTTTTGAAAACCCAATCACTCGACCAGCACTAAGAATGGCTGCACGTAAACACATTGGTGATACTGGACTGTTGGACCACTTACTGAAGCACATTGACGGTAAAGTGGCACCTGGAGGGACGGAGCGGTTTCGGCGGTGGTATAACACCGAAGGAACCATGGAGTATTGGTTGGAGAGTGCTAACCTGGATAAGGTTCGCCACGACGCTGGGGTGCAGGACCCTTACTGGATACCACCATCTGCATTTAGGCCAGGCCCTGGGCCTGCTCAAAATACTGATTTTTCTGATGAACTGAAACTGCTTCAAACAGAAATGGCCAAAATGAAGAGAGATATGCAGGAGCTTACATCTGAAAAGCAAGAgaagaatgaaatgaatatgATGGAGGAGATACACAAGAATTTGAAGTGGAAAGCTATGACTGAACAACGCCTAACTGAGATTATCACTTCTTTGAAGGGTGTGCAGgGCATGTATGGTGATTTGGTGACTTGGAAGACTAAAGTTGAGCAACAGCTAGTGGAAATAACAACTAAACTGAGTGATCTGCAAACATCAAGGGAACGTAGCACTTTTAGTCCTCCTTCTGAAAGAGGGGAAGATTGGCTAGAGAGCACCAACCTTGACAATATTCAGGGAAATGATCTTGCACCTTGGTTTGCTAGTACAGAACTACTTAATGTTGAGCAAGAGGTTGTTCTTCAAGATCCTAACTCAGCCTTACCAGCTCAGATATTCAATTCAGAACTGACTAACATGAAGAGCAATGTGCTGGAGGTGGTGCCAAAGAAGCAAGAGGAAGATAAACTTATTGTAACCCCGGATTCGTCCATCATTGTTAACTCAAAGTCAGACCTTGACAACtcattgatattttttcaGGAGATGTTTATGGATTTGTTTAAATGGAAAGATAAAATCGAGCTGCAGCTGTTGGAGGTATCAAATTCTGTATATGGTATGCAGGCAATGAAGTA 1286 0.4222 MIRVIGQQEENQSQHSSSISMEEDSKDEVTVKADPLLIPEIKKRKRLSLTELREIKAELGGKERQSCSKLKIKKHGSTDRWSTERYELAEKSMWEVLKAEGATFENPITRPALRMAARKHIGDTGLLDHLLKHIDGKVAPGGTERFRRWYNTEGTMEYWLESANLDKVRHDAGVQDPYWIPPSAFRPGPGPAQNTDFSDELKLLQTEMAKMKRDMQELTSEKQEKNEMNMMEEIHKNLKWKAMTEQRLTEIITSLKGVQGMYGDLVTWKTKVEQQLVEITTKLSDLQTSRERSTFSPPSERGEDWLESTNLDNIQGNDLAPWFASTELLNVEQEVVLQDPNSALPAQIFNSELTNMKSNVLEVVPKKQEEDKLIVTPDSSIIVNSKSDLDNSLIFFQEMFMDLFKWKDKIELQLLEVSNSVYGMQAMK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00163 428 PANTHER DYAD PROTEIN 4 428 - -
Bva05g00163 428 MobiDBLite consensus disorder prediction 1 19 - -
Bva05g00163 428 Coils Coil 194 228 - -
Bva05g00163 428 PANTHER PROTEIN DYAD 4 428 IPR044221 GO:0007131|GO:0051177|GO:0051321
Bva05g00163 428 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00163 Bva-Chr5 806166 809898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00163 80 161 PHD Transcription Factor Family AT5G22260 40.964 5.64e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00163 - - gmx:100806484 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00163 05 806166 809898 Bva05g00163 05 806166 809898 ECH