LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva05g00162	ATGGCCTCGTCTTCTCACTCCCATCAAAACCTCAAAAACAGCAGCGACGACAACAACAGCAACAAAGAAGGGAAGGCACTAAAAAATGGACAAGATGAAGAACAAAAGGACTGGCTCGAGCTAGGTTTGGGGTTAGGAATTGGCATCTCGGGGAAGAAAGTAACAGCCAGTCATGGATCAAACCCAGTTTCAGATTCACCTTCAACTACTTCATTCCTGAAAATACCAAGcaaacatcatcaaatagaaattgggctagggttagggttagaAAAGATTCCAGCTTTAGGGCTAAATGATAATGAAGGTTTGAGGGATGTTATGGGTATGGAAGCTTTACCTCCTCCAAGAGATTATGATCGCCATAGCTTGTTTGGGTCAGAGCTAGATCATTCTAACTATTatcataacaataacaatgaTTGTGGCATGGAATTGTGGCCATCATGCCAAATGGGTTCACAAGAGTGGCATATGCCAACTCCTGGTGATTCTCATCATTACTGCACCAGAATCAGAAGCCCCCACGAGTCTGGTTTGTGGTTTACGCTACGCCCCTCTACCAACCGAACTGGAGAAGCTTTGCCTCAAATACCGAAGGCGTATATTAGAGTGAAAGACGAAAACATGACGATTTTCTTGGTGAAAAAGTATCTGGTTACAAAACTTGGTCTCTCCGACGAAGCTGAGattgatatctcatgcatgGGTCAGAGCTTGTCGCAAATGCAAACCTTGAAGCAAGTTAGAGACACGATTTGGCTGCCTAGACTGGTACAATCTGTAAACACCACCACCATGTCACTTGGAGACGCCAACCATTTAATGTCATTGCTTTACCAAAAACGATGCATCTTCAACTG	863	0.4044	MASSSHSHQNLKNSSDDNNSNKEGKALKNGQDEEQKDWLELGLGLGIGISGKKVTASHGSNPVSDSPSTTSFLKIPSKHHQIEIGLGLGLEKIPALGLNDNEGLRDVMGMEALPPPRDYDRHSLFGSELDHSNYYHNNNNDCGMELWPSCQMGSQEWHMPTPGDSHHYCTRIRSPHESGLWFTLRPSTNRTGEALPQIPKAYIRVKDENMTIFLVKKYLVTKLGLSDEAEIDISCMGQSLSQMQTLKQVRDTIWLPRLVQSVNTTTMSLGDANHLMSLLYQKRCIFN	287

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva05g00162	287	PANTHER	-	20	287	-	-
	Bva05g00162	287	MobiDBLite	consensus disorder prediction	18	34	-	-
	Bva05g00162	287	MobiDBLite	consensus disorder prediction	1	17	-	-
	Bva05g00162	287	PANTHER	RING FINGER PROTEIN	20	287	IPR044171	GO:0007275
	Bva05g00162	287	Gene3D	-	164	262	-	-
	Bva05g00162	287	MobiDBLite	consensus disorder prediction	1	34	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva05g00162	Bva-Chr5	800195	805242	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva05g00162	195	233	C3H Transcription Factor Family	AT3G23060	53.846	4.98e-06	45.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva05g00162	-		-	jre:108982202	226.098