Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00159 ATGGAGAGGAAATCGCTTGGGCTTTTCGTTTTGCTCCTCATTGCCTTGGCTACTCaAGAAGTGGTGGTGCAGACAGAGGGAAGGATGTGCCAGTCACAAAGCCACATGTTCAAGGGGCCATGCGTGCATGACCACAACTGTGCTCTCGTCTGCAGAAATGAGGCTTTCTCCGGTGGCAGATGCCGAGGATTCCGTCGCCGCTGTTTTTGCACTCGCCTTTGttg 224 0.5312 MERKSLGLFVLLLIALATQEVVVQTEGRMCQSQSHMFKGPCVHDHNCALVCRNEAFSGGRCRGFRRRCFCTRLC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00159 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Bva05g00159 74 PANTHER DEFENSIN-LIKE PROTEIN 1 2 74 - -
Bva05g00159 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Bva05g00159 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Bva05g00159 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
Bva05g00159 74 Pfam Gamma-thionin family 28 74 - -
Bva05g00159 74 PANTHER DEFENSIN-LIKE PROTEIN 2 74 - -
Bva05g00159 74 Gene3D - 28 74 IPR036574 -
Bva05g00159 74 SMART gth_4 29 74 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00159 Bva-Chr5 783246 783555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00159 1 74 Plant Defensins Gene Families AT5G63660 60.811 1.90e-28 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00159 - - pop:7465900 81.2629