LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva05g00159	ATGGAGAGGAAATCGCTTGGGCTTTTCGTTTTGCTCCTCATTGCCTTGGCTACTCaAGAAGTGGTGGTGCAGACAGAGGGAAGGATGTGCCAGTCACAAAGCCACATGTTCAAGGGGCCATGCGTGCATGACCACAACTGTGCTCTCGTCTGCAGAAATGAGGCTTTCTCCGGTGGCAGATGCCGAGGATTCCGTCGCCGCTGTTTTTGCACTCGCCTTTGttg	224	0.5312	MERKSLGLFVLLLIALATQEVVVQTEGRMCQSQSHMFKGPCVHDHNCALVCRNEAFSGGRCRGFRRRCFCTRLC	74

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva05g00159	74	SUPERFAMILY	Scorpion toxin-like	28	74	IPR036574	-
	Bva05g00159	74	PANTHER	DEFENSIN-LIKE PROTEIN 1	2	74	-	-
	Bva05g00159	74	PRINTS	Purothionin signature	29	44	IPR008176	GO:0006952
	Bva05g00159	74	PRINTS	Purothionin signature	59	73	IPR008176	GO:0006952
	Bva05g00159	74	ProSitePatterns	Gamma-thionins family signature.	28	51	IPR008176	GO:0006952
	Bva05g00159	74	Pfam	Gamma-thionin family	28	74	-	-
	Bva05g00159	74	PANTHER	DEFENSIN-LIKE PROTEIN	2	74	-	-
	Bva05g00159	74	Gene3D	-	28	74	IPR036574	-
	Bva05g00159	74	SMART	gth_4	29	74	IPR003614	GO:0006952

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva05g00159	Bva-Chr5	783246	783555	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva05g00159	1	74	Plant Defensins Gene Families	AT5G63660	60.811	1.90e-28	95.5

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva05g00159	-		-	pop:7465900	81.2629

Showing 1 to 1 of 1 entries