Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00152 ATGGAGGAGCAGGATATCAAATTTCTGTGCAAGAGGAAAGGTGGGAATAGGAAAAAATATCAGACCCATAAAGAGTGGTGCCGAACTGTCCAATCTCAACCTGATGTGATCTCAATGTCATTCATACCAATTACATCTTTACTTGGTGGAATTAATGGAAGTGGATTTTTGACGCATGCCATAAATCTCTATCTTCGATATAAACCTCCAGTTGAAGAACTACATCAGTTCTTGGAGTTCCAGATTCCAAGGCATTGGGCCCCTGTTTTTGGTGAGCTTGCACTTGGTCCTGAAAGGAAGGCACCAAATAATGCGTCTTTGCAGTTCAGTTTCATGGGCCCTAAGCTTTATGTGAACACAACACCGGTTGATGTGGACAAGAAGCCTGTGACGGGCCTTCGATTGTatttggaaggaaagaaaagcaacTGCTTGGCGATCCACTTGCAACACCTTTCCTCACTGCCCATGTCCCTCCTACTGGAGGATGAGCTGAATGAGAGTGCATCAAATGCCTCCTCTGAACACAAGTACTATGAGAAGGTCCAGTGGAAGAGTTTCTCTCATGTATGCACAGCTCCTGTCGAATCTGACGAGGATAACAACGTTGTGACCGGCGCTTACTTCCAAGTTGGAGAGACTGGTTTAAAGAAAGTTTTATTCTTAAGACTTCATTTCTCTAAAGTTGTTCGTGCAACAAGCGTGAAAAGGACCGAATGGGATGGTTCTCCTGGCTCTACCCAGAAATCTGGAATAATCTCAACTATAATTACCACTCGTTTCTCAACTCCTCAAAAACCCCCTCCACAGCCATCTGATGTGAATGTTAACTCTGCTGTATACCCTGGAGGACCTCCTGTGCCCACGCAATCGCCTAAACTTCTGAGATTTGTTGACACAACAGAGATGACAAGAGGACCACAGAACTCCCCTGGGTACTGGCTTGTGTCTGGAGCAAGGCTTTTTGTGGACAAGGCAATATATACAAACGGAGGCCGCTCTCCTCTCGCTTCACCGCACATCCTAACTTACAACATTCAGCTAGCTTTACCGTCGCTTCTCTCTGTTGATAGAAATAACCGTGGTTCTGTCTCAATGCCTCTTTTAAAGCGAAAGCTTTTTGTCTTGGCCGAGCCACCCAAGGATTTGGAGACCCATGAGCTTGTTTACCAAGTCCGattcacaaaagaaatattccgAGATTATCATAATTATTTGAACCGTATGAATTTATATCGCCAGAGAGTTTGGATGTGTAAAGTCACTGGTAAAACTGGCTTGACTTATGAGGAGGCTTTGTTATCGGAAAAACGTGCCACTGAAAAAGTTCAACAATTTCCCAAAGAATTAATACCTCCTGCTCTGCGAATTATTCAGTACAGTATGCTCTCTTTAAAGGATCTTGCCGATGCAGTAGCTGCAAAATTGCAGGAACGATTGTTTGTGGGTGCTGAGCTGTATGGTAAAAAGGATGATGATGTACATCCTTGCAGAATATTAAAAGTCATAGAGGAAGGGGTTGATAAATTCCGTTATGAGGTAGCTTGGCTTGATAAAAATAGGAATATAATTGGAAGTGCACAAGTAAGCGCCAAAGAATTGGTACAAAAAAAGCAGCCTTTTAGTAGGAACATGTTGAAGTCCTTTATCCGGGAATCTACACATCGTAATGTTCCTTGGGTGCTACATGATGAACTAGCACGGAATTATGGGATTTCAACTGATATCCCAGAGGAATTAAGAGGACAGATTTTCTTCAGGAATGGGCTTCTGGTCtgcaataagaaaagaaaaaatgagGAATTAAAAGGAGAAactgaaaaatgtaaaaggaaGAAATCGGACGCGAGGAAAGTTGATGGTTCTAACACAGAGGAAGAAAATGACCAACTCAACGAAGAACCAGTCAAATATCCTATTGATGATCTACTGGTGAAGCCTAGTCCAGATGATCCTGTTTTCACTGAACGTCCTTCTCCATCAAGAGATTTCAATGTTCCAATTTATTGTGTAGGGGATCTCTTAATGGTTTGGGACTTTTGCACTTCATTTGGGAGGCTGTTACACCTGTCGCCCTACTCTTTAGAAGACTTTGAAAATGCAATCTGCCACAAAGAGAGCAATGTGGTTCTCCTTGTGGAATCTCATGCAGCACTCTTACGATTGCTCATAAAAGATCGTGGCGAATTCTCTTCAGCTGTAGAGAATAAAAATCGGAAGTCTAAGataACAATGATTACTTGGACAGACTATCTATGCGATTTTCTAGAAATGATCAAGGTTTCTGGATTACGCCAATATGAAGCTACCATAAAACGTGGGCATTATGGCCTTGTGGATGCTCATGCAAAATTAGAGATTTTATGTGAATTGGTCAATCGAGCCCTTGAAACTGTGACTATCAGGGAACAGCTGGATGATTTTATTGAGCAGCGCCAGGTACTTGGGGCCACTAGAAGGGGAGAAGCAATAGAAGATGCTAGAAAGAGGAGAGAACACAAGGAACGGTTGAAAGCTGAGCCTGACAGTAATGGAAGTGCGGATGGGCATCTAGCAAGTATCTCGGAAAATGATAATCACAGTAGACAGAATGGAGAtgtagaaaagaagagaaatggaGAGATAGAATCATCTGGGCAAAAGGATGCACTGGATAGAAGaagTGGGATCGAGAATTCAAACCCTggatcaaaaaagaaatctaagaAGCTAAGTTCTGAGCTGAAAGAACCAGCAGAAAATGGAAAGGAATCACAGAAACCGTTGAAGGGTGATAAGGATCTATCATACAAGACTAGTATAGAACAGCGGAGAGAACATTATGAGCGGGAGATGGAGAAACGATTTATTCGTACAAACCCCTTGGGTAAAGACAGATATCATAACAAGTACTGGTGGTTCCGCCGTGATGGGAGGATATTCGTTGAGAGTCCTGAATCCAAGGAGTGGGGATACTATGGCAGCAAGGAAGAGCTTGATGCATTGATGGGTTCACTGAACTGTAAGGGTGAACGCGAAAGGGCACTACAAAAACAAGTGGAAAAATATTATGGTAGAATATGCTCAGAACTCCAGAAGAGATCAAGGGATCTGACAAATAAGATTGCACTGGACGAGTCTGTGGTCCGAAGGTCTACTCGTGTTCGTGCCCCGCCTAGGGAAAATCCTGCTAATGCCTTCCTCAGATATGTTAATAAGTGGAAAGAAGAGTA 3212 0.4141 MEEQDIKFLCKRKGGNRKKYQTHKEWCRTVQSQPDVISMSFIPITSLLGGINGSGFLTHAINLYLRYKPPVEELHQFLEFQIPRHWAPVFGELALGPERKAPNNASLQFSFMGPKLYVNTTPVDVDKKPVTGLRLYLEGKKSNCLAIHLQHLSSLPMSLLLEDELNESASNASSEHKYYEKVQWKSFSHVCTAPVESDEDNNVVTGAYFQVGETGLKKVLFLRLHFSKVVRATSVKRTEWDGSPGSTQKSGIISTIITTRFSTPQKPPPQPSDVNVNSAVYPGGPPVPTQSPKLLRFVDTTEMTRGPQNSPGYWLVSGARLFVDKAIYTNGGRSPLASPHILTYNIQLALPSLLSVDRNNRGSVSMPLLKRKLFVLAEPPKDLETHELVYQVRFTKEIFRDYHNYLNRMNLYRQRVWMCKVTGKTGLTYEEALLSEKRATEKVQQFPKELIPPALRIIQYSMLSLKDLADAVAAKLQERLFVGAELYGKKDDDVHPCRILKVIEEGVDKFRYEVAWLDKNRNIIGSAQVSAKELVQKKQPFSRNMLKSFIRESTHRNVPWVLHDELARNYGISTDIPEELRGQIFFRNGLLVCNKKRKNEELKGETEKCKRKKSDARKVDGSNTEEENDQLNEEPVKYPIDDLLVKPSPDDPVFTERPSPSRDFNVPIYCVGDLLMVWDFCTSFGRLLHLSPYSLEDFENAICHKESNVVLLVESHAALLRLLIKDRGEFSSAVENKNRKSKITMITWTDYLCDFLEMIKVSGLRQYEATIKRGHYGLVDAHAKLEILCELVNRALETVTIREQLDDFIEQRQVLGATRRGEAIEDARKRREHKERLKAEPDSNGSADGHLASISENDNHSRQNGDVEKKRNGEIESSGQKDALDRRSGIENSNPGSKKKSKKLSSELKEPAENGKESQKPLKGDKDLSYKTSIEQRREHYEREMEKRFIRTNPLGKDRYHNKYWWFRRDGRIFVESPESKEWGYYGSKEELDALMGSLNCKGERERALQKQVEKYYGRICSELQKRSRDLTNKIALDESVVRRSTRVRAPPRENPANAFLRYVNKWKEE 1070
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00152 1070 SMART testlast3 668 729 IPR018501 -
Bva05g00152 1070 Pfam DDT domain 670 726 IPR018501 -
Bva05g00152 1070 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 389 485 IPR013136 -
Bva05g00152 1070 MobiDBLite consensus disorder prediction 825 933 - -
Bva05g00152 1070 MobiDBLite consensus disorder prediction 603 633 - -
Bva05g00152 1070 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 78 IPR020864 -
Bva05g00152 1070 ProSiteProfiles WAC domain profile. 387 492 IPR013136 -
Bva05g00152 1070 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 366 1068 - -
Bva05g00152 1070 MobiDBLite consensus disorder prediction 825 843 - -
Bva05g00152 1070 MobiDBLite consensus disorder prediction 861 933 - -
Bva05g00152 1070 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 950 1016 IPR028941 -
Bva05g00152 1070 Pfam MAC/Perforin domain 9 64 IPR020864 -
Bva05g00152 1070 ProSiteProfiles DDT domain profile. 668 729 IPR018501 -
Bva05g00152 1070 Coils Coil 595 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00152 Bva-Chr5 746950 757188 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00152 670 726 Homeobox Transcription Factor Family AT1G28420 45.614 3.26e-06 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Bva05g00152 WAC_Acf1_DNA_bd 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00152 - - gmx:100789956 981.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00152 05 746950 757188 Bva05g00152 05 746950 757188 ECH