Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00144 ATGCGCATGTCTGAAGCTAGTGAGTTTGCCTCAAAGATCAAAGGGACTAATATGGTTTGCCACTGGGATCCTCTAAAACTATTGATAAGGTGGCTGATACTCCTCAGTTTCTCAAGATTGTGCTATACATCCTCGGATCCAGATGTGGAAGGTGAAGCATTGCTTGAATTTTTGAAGGGTCTAAATGATGTGAATCATCGAGTTAACTGGGATGAATATTTGGTGAGTCCATGCTATAGTTGGTCTCACATTACTTGTAGAGATGGACATGTCATAACCCTGAGTCTGCCCTCGAATGGATTTTCTGGAACCCCTTCTCCTTCAATTGCCAAACTGAAGTATTTGGTTACCTTGGAACTGCAGGGCAACAATCTTTCAGGGTTGTTACCTGATTATGTTGCCAATTTGACAAATCTTCAATATCTAAATCTTGCTGATAATAATTTCAATGGTCCTATACCAGCTACATGGGGTCAATTTTCCAGTCTAAGGAATTTGATTTTGAGAGGGAATGACTTATCTGGACCCATTCCAGATACTCTTGCAAATATTAGTGGGTTGGCAACTCTGGATCTTTCATCTAATGATCTAACTGGAAGCATCCCATCACAGCTCTTTTCACTTCCATTCTTTAACTTTTCTGATACCCGCCTTCACTGCGGTTCCAGCTTGGAGAAGCCTTGTGTTTCTAATTCTGCTCTTCCAGCTTCAACCAATAAATCAAAACTTGCTGTTATTGTTAGTTCCGCAAGTTGTGTTGCATTTGCACTTCTGAGTCTTGGGGCCATTTTTGGATATAGATCCCGTTACACGCCCAAGAACAAAAAGGATGTCTTTGTTGATGTTTCAGGTGAAGACGAGagcaaatttttatattggcAACTTAGAAGATTTTCCTTGCGCGAACTTCAACTTGCTACTAACAACTTCAGCGAAAGCAATGTAATTGGGCACGGAGGCTTTGGAAAAGTTTATAAAGGAGTACTCTCAGATCATACGAAAGTTGCAGTGAAACGCTTGACAGATTATTATAATCCTGCCGGAGAGGCTGCATTCATAAGAGAAGTCGAACTCTTAAGTGTTGCAGCTCATAGGAATCTGCTACGATTGATTGGGTTCTGTGCAACCTCAACTGAAAGAATTCTTGTATATCCTTTCATGGAAAACTTAAGCGTAGCAAATCGGTTGAGAGATTTGAAACCTGGCGAGAAAGGTTTGGATTGGGCAACAAGGAAACGCGTGGCTTTTGGAACAGCCCATGGATTGGAGTATCTGCACGAACAATGTATTCCTAAAATTATACATCGTGATTTAAAGGCTGCAAACATCCTATTAGATGACGAGTTTGAAGCTGTTCTCGGAGATTTTGGGTTGACTAAGTTGGTTGACACAGGAATGACTCACGTTACCACTCAAGTGCGTGGCACAATGGGTCATATTGCCCCAGAATATTTGTCGACTGGAAAATCATCAGAAAAGACAGATGTGTTTGGATATGGCATAACCCTACTTGAACTCGTGACCGGTCAGCGGGCAATAGACTTGTCTCGCCTGGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATCAAGAAGCTTCTGAGAGAAAACAGGCTAGAGGACATTGTGGATACAAATTTGGAGAGTTATGATCCCAAAGAAGTTGAAAGAGTTGTTCAGGTTGCAATGCTCTGTGCCCAAGGCTCGCCGGAGGAGCGTCCAATGATGTCAGAGGTGCTGAAATTGCTGCAGGGAGTTGACCTGCCAGAAAGGTGGGCTCAATGGGAGAGGGACCAGCTTCAGGAGGCTACCATTGAAAAATTCTCACCCAGGAATCAAGATATTGTTTGGGATGGAGAAACTAGTCATGACCAAGAGGCTATACAGCTTTCTAGAGCAAGATA 1904 0.4228 MRMSEASEFASKIKGTNMVCHWDPLKLLIRWLILLSFSRLCYTSSDPDVEGEALLEFLKGLNDVNHRVNWDEYLVSPCYSWSHITCRDGHVITLSLPSNGFSGTPSPSIAKLKYLVTLELQGNNLSGLLPDYVANLTNLQYLNLADNNFNGPIPATWGQFSSLRNLILRGNDLSGPIPDTLANISGLATLDLSSNDLTGSIPSQLFSLPFFNFSDTRLHCGSSLEKPCVSNSALPASTNKSKLAVIVSSASCVAFALLSLGAIFGYRSRYTPKNKKDVFVDVSGEDESKFLYWQLRRFSLRELQLATNNFSESNVIGHGGFGKVYKGVLSDHTKVAVKRLTDYYNPAGEAAFIREVELLSVAAHRNLLRLIGFCATSTERILVYPFMENLSVANRLRDLKPGEKGLDWATRKRVAFGTAHGLEYLHEQCIPKIIHRDLKAANILLDDEFEAVLGDFGLTKLVDTGMTHVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDTNLESYDPKEVERVVQVAMLCAQGSPEERPMMSEVLKLLQGVDLPERWAQWERDQLQEATIEKFSPRNQDIVWDGETSHDQEAIQLSRAR 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00144 634 Pfam Protein kinase domain 311 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00144 634 SUPERFAMILY L domain-like 50 313 - -
Bva05g00144 634 Gene3D Transferase(Phosphotransferase) domain 1 387 602 - -
Bva05g00144 634 Gene3D Phosphorylase Kinase; domain 1 279 386 - -
Bva05g00144 634 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 26 634 - -
Bva05g00144 634 Pfam Leucine rich repeat 93 149 IPR001611 GO:0005515
Bva05g00144 634 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Bva05g00144 634 SMART serkin_6 310 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00144 634 Gene3D Ribonuclease Inhibitor 47 230 IPR032675 -
Bva05g00144 634 PANTHER LRR RECEPTOR-LIKE KINASE 26 634 - -
Bva05g00144 634 Pfam Leucine rich repeat N-terminal domain 49 86 IPR013210 -
Bva05g00144 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 433 445 IPR008271 GO:0004672|GO:0006468
Bva05g00144 634 SUPERFAMILY Protein kinase-like (PK-like) 288 584 IPR011009 -
Bva05g00144 634 ProSiteProfiles Protein kinase domain profile. 310 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00144 Bva-Chr5 712999 716866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00144 34 634 Receptor kinase-like Gene Family AT5G10290 54.305 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva05g00144 Pkinase 6.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00144 - - jre:108996276 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00144 05 712999 716866 Bva05g00144 05 712999 716866 ECH