Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00127 atgaaaaagaaagaagtcaGTGATGGTTCTTCCTCAAGTGGTGAGAACGAGGATTTAGAATCTCATTCTGAACATAGTCTGGAGAAGGAGACAGGTTGTAGAAGTTGTCGTGTGTGCCAATGTGCTGAATCTGATAAAAGGGGAGATGCTGCACTAGAATTTTTGGACATTGCTCCAATTATAGAAGTGCATAAAAGCAACGGGGAAGTGAGCTCTAATGGCCAGAAAATTCCAAATGATATGTCTCTGAAAAGAAATGTTGGAAGCAAATCTGGGGTGGTGGAATTTGTAAGCCCTGATGGAGAAGTTTTCATTTGTAACACTGATTTGGAAACGGGTCTGTCTCATCAGGATGCATTAATTGAACTTGGTTGTTCTTGTAAAGATGACGTTGCTCTTATACACTATGCTTGTGCACTCAAATGGTTTGTCAACCATGGATCTACCGTTTGTGAAATATGTGGACATCTGGCAGAAAATATCAGAATTTCCCACTTCAATAAAGTTGTTGGTTCTTTAAAGGAGTATGAAGCATTGAGGGAGAGAACTGCATGCGGGGAACCAAGTCCTGCTCAAGTTCAAGCAAACACTAGTGTGGATCCCGATGCTGTGGCTGCTATTCGGAGGCAAAGGCTAAGTGAGATTGCACTATGGTTTTGCCCGCATAATAACAGTAACAATAACAACGCAGACACAGTTTCACAGGTTGTTTCCGAACAACCTTTGAACTCTGTTGTCGAGGACACTGCCCCTACTGAAAATCCAGCAACTAAGTGGGCCATAGAAGGAACTGGGATCCTGCTTGCTACTGGACTACTTACTGTCACCCTTGCATGGCTTATAGCTCCTCGTGTCGGAAAGAGTACTGCAAGAAGTGGTCTTCATGTCCTGCTTGGAGGCATTTGTGCTTTGACAGTTGTGGTTTTCTTCCGATTCTTCGTGCTTACTAGAATCAAGCATGCACCTGCGCGTTATTGGGCaatcttatttgttttctgCCAGATTCCAAAGAAGATTGTAGCAGTAGCAGTAGCATCAGCAGAATGGTTTGCATCACTCCCTCAACAGCTATTAACAGGAAAACAGAGGTATGTTGGCCGGGACTTAATGTGCTGCAGTCCACTGTCAGCTATTCGATATTGGCTGTG 1148 0.4268 MKKKEVSDGSSSSGENEDLESHSEHSLEKETGCRSCRVCQCAESDKRGDAALEFLDIAPIIEVHKSNGEVSSNGQKIPNDMSLKRNVGSKSGVVEFVSPDGEVFICNTDLETGLSHQDALIELGCSCKDDVALIHYACALKWFVNHGSTVCEICGHLAENIRISHFNKVVGSLKEYEALRERTACGEPSPAQVQANTSVDPDAVAAIRRQRLSEIALWFCPHNNSNNNNADTVSQVVSEQPLNSVVEDTAPTENPATKWAIEGTGILLATGLLTVTLAWLIAPRVGKSTARSGLHVLLGGICALTVVVFFRFPDSKEDCSSSSSISRMVCITPSTAINRKTEVCWPGLNVLQSTVSYSILAVSECRLS 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00127 368 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 14 313 - -
Bva05g00127 368 PANTHER ZINC FINGER, RING-CH-TYPE 14 313 - -
Bva05g00127 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 157 IPR013083 -
Bva05g00127 368 SMART ringv_2 105 155 IPR011016 GO:0008270
Bva05g00127 368 ProSiteProfiles Zinc finger RING-CH-type profile. 95 161 IPR011016 GO:0008270
Bva05g00127 368 SUPERFAMILY RING/U-box 120 157 - -
Bva05g00127 368 MobiDBLite consensus disorder prediction 1 28 - -
Bva05g00127 368 Pfam RING-variant domain 120 154 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00127 Bva-Chr5 635289 640588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00127 6 312 C3H Transcription Factor Family AT5G08750 61.875 2.16e-125 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00127 - - gmx:100805323 430.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00127 05 635289 640588 Bva05g00127 05 635289 640588 ECH