Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00125 ATGAAGAGTGAAATAGAGTTGCCGCCTGGGTTCAGATTTCACCCAACCGACGAGGAACTTGTCAACCACTATTTGTGTAGGAAATGCGCTGCGCAGTCCATTGCTGTTCCCATTATCAAAGAGATTGATTTGTATAAGTTTGATCCATGGCAGCTTCCAgGAATGGCTCTCTACGGAGAGAAAGAGTGGTACTTCTTTTCTCCAAGAGATAGGAAATATCCAAACGGTTCACGACCGAACCGGGCGGCTGGAAGCGGGTATTGGAAGGCAACCGGAGCCGACAAGCCGATTGGGAAGCCAAAACCACTTGGTATCAAAAAGGCACTTGTGTTTTATGCCGGTAAAGCACCCAGCGGCATCAAAACCAACTGGATCATGCATGAATATCGCCTCGCCAATGTTGACAGGTCTGCCGGCAAGAAAAAGAACTTGAGGCTTGACGATTGGGTATTATGCCGAATTTACAACAAGAAGGGCACTGTAGAGAAATACAGCAGCCCCATAGATCATAAAGTACCCACTTTTTCTGAAATGCACGAGCACGAGACAAAGCCAGAAATCAAAATGGTTGGCCAACAAAACATTGTAGCACCATCAACGTTCACGGGTGACCAATTGTACATGGACACATCGGATTCGGGGCCCAGGGTGCACACGGACTCGAGCAGCTCGGAGCATGTGGTTTCACCCGATATGACGTGGGACAAGGAGGTCCAGAGTGAACCAAAGTGGAATGATCTGGTACTAGGAGTAGGAGATGCCTTCGATTTGCAGTTCAATTACATGGACAACTTCTCTGCGGATGACCCTTTTGCCCCTGGGCAAACGAACAACCTCTCCCCATTGCAGGACATGTTCATGTATCTACAGTA 872 0.4805 MKSEIELPPGFRFHPTDEELVNHYLCRKCAAQSIAVPIIKEIDLYKFDPWQLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPSGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTVEKYSSPIDHKVPTFSEMHEHETKPEIKMVGQQNIVAPSTFTGDQLYMDTSDSGPRVHTDSSSSEHVVSPDMTWDKEVQSEPKWNDLVLGVGDAFDLQFNYMDNFSADDPFAPGQTNNLSPLQDMFMYLQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00125 290 PANTHER NAC DOMAIN-CONTAINING PROTEIN 2-LIKE 5 271 - -
Bva05g00125 290 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Bva05g00125 290 MobiDBLite consensus disorder prediction 211 229 - -
Bva05g00125 290 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Bva05g00125 290 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Bva05g00125 290 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Bva05g00125 290 PANTHER NAC TRANSCRIPTION FACTOR 56 5 271 - -
Bva05g00125 290 MobiDBLite consensus disorder prediction 211 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00125 Bva-Chr5 629898 631963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00125 1 290 NAC Transcription Factor Family AT1G01720 66.216 2.82e-130 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva05g00125 NAM 1.7e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00125 - - qlo:115973450 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00125 05 629898 631963 Bva05g00125 05 629898 631963 ECH