Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00101 ATGGCTTTGGAGCAGCCATTATCACTCGGTCCCATTCCGAATCATGCTGACGGTGAAGCAGACGGGACTACTAACGGCGTCGATATTCGGCCGCCGTCAACGGATGGCGGAGACGATGGAAGCAAAGCTCCTAGGCTCCCTCGCTGGACTAGACAGGAGATTCTCGTTCTGATACAGGGGAAGAGAGATGCGGAGAACCGGTTTCGTGGGGGTCGCGCTGCAGGGTTGCCATTCGGGTCGGGTCAGGTGGAGCCGAAATGGGCTTCGGTGTCATCATACTGCAAGAAGCACGGAGTTAACAGAGGGCCTGTTCAGTGTCGTAAGAGGTGGAGCAATTTGGCCGGAGACTATAAGAAGATCAAAGAATGGGAGTCCCATATAAGAGAAGAGTCGGAATCGTTTTGGGTGTTGAGAAATGATTtaaggagagagaagaaattgcCAGGGTTTTTCGACAGGGaggtttatgatattttagatTCAGGGTCACAGGCGCCGGTGTTAGCTCTATCTCTTGCACCGTCTCCAGCAACAGTAACGGAGCCTGTGGAAAAGGGGAAGGACGGTGAAGCATTGACGGCAGAGGAAACTGAGGTTTATACGGAGCGTCTTTACGATAGTAATCGGAGTGGGACTGGGGGGGATGGCTTGTTCTCCGATTTTGAACAAGAGGAGGAGGGTGCGAGTCTGGAGAAGGAGGCTGCAAGAAAGAATGTGTTGGCTATCCCTGCGCCTATTCCAATCTCAGAGAAGCAATATCAGCCATCTCTGCGTCCATGTCAAGTTGAAGACAATGCTCAAGgTGGGAGCAATGAAAAACAGGGACAGGGAGGGTCAAATCCAGAAATGGGTTCGACATCTCAAGGAGTAcggaagaggaagaggtttAAAACAGACGGTGGAGAAGAGGAAGATTTACAATCTCAATTAGTCGATGTCTTGGAAAGAAACGGGAAGATGCTAAGCACACATCTTGAAGctcaaaacttaaatttcCGGTTGGATATCGAGCAGCGGAAAGATCATGCTAGGAACTTGGTTGCCGTTCTCGATAAGCTTGCAGATGCTCTCAGCAGAATTGCTGACAAACTCTA 1094 0.4735 MALEQPLSLGPIPNHADGEADGTTNGVDIRPPSTDGGDDGSKAPRLPRWTRQEILVLIQGKRDAENRFRGGRAAGLPFGSGQVEPKWASVSSYCKKHGVNRGPVQCRKRWSNLAGDYKKIKEWESHIREESESFWVLRNDLRREKKLPGFFDREVYDILDSGSQAPVLALSLAPSPATVTEPVEKGKDGEALTAEETEVYTERLYDSNRSGTGGDGLFSDFEQEEEGASLEKEAARKNVLAIPAPIPISEKQYQPSLRPCQVEDNAQGGSNEKQGQGGSNPEMGSTSQGVRKRKRFKTDGGEEEDLQSQLVDVLERNGKMLSTHLEAQNLNFRLDIEQRKDHARNLVAVLDKLADALSRIADKL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00101 364 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 364 - -
Bva05g00101 364 MobiDBLite consensus disorder prediction 261 287 - -
Bva05g00101 364 Pfam Myb/SANT-like DNA-binding domain 48 135 IPR044822 -
Bva05g00101 364 MobiDBLite consensus disorder prediction 1 47 - -
Bva05g00101 364 Gene3D - 49 119 - -
Bva05g00101 364 CDD GT1 47 121 - -
Bva05g00101 364 MobiDBLite consensus disorder prediction 206 232 - -
Bva05g00101 364 MobiDBLite consensus disorder prediction 261 306 - -
Bva05g00101 364 ProSiteProfiles Myb-like domain profile. 48 114 IPR001005 -
Bva05g00101 364 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 25 364 - -
Bva05g00101 364 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00101 Bva-Chr5 509322 512179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00101 48 122 Trihelix Transcription Factor Family AT1G33240 33.333 2.88e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva05g00101 Myb_DNA-bind_4 3.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00101 - - gmx:100797767 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00101 05 509322 512179 Bva05g00101 05 509322 512179 ECH