Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00098 ATGTTTAAGAAAAGATATATCCTCTCTTATCTCATAAAGGAAATCTGCAATTCTCTCTTGCTATTCTTATTAAGCTTGCACTATACAACAGTGCAATGCCAAGGAAGGTTAAGTCAGCACATGTCTTCAGAGCTCCCATCGCCGACTGGACCATCAGAATACAAGAACAGCCTCCGGAAGATCATTCTCAGCATTGTTTTAGGAGTACTAACGGGACTAGTTGGCTCTGTTGTTTTCGCACTTTTAGTTCGTTGCTTTGTTCAGTATTTGAAGAGGACCCCAGTTCTCAAGGGCCCCGTCATATTTTCCCCAAAAATTGCTCCCAAGACACTCCAATCAGCTTTGGCTAAAGAAAACCATTTGCTTGGCTCAAGCCCAAATGGGAAATACTACAAAACAGTGCTAGACAATGGTCTCACTATTGCAGTCAAGAGGCTAACACCCTTTGAAAGCGGTTCTCCAGAGACTCGGAGAAAATCGGTGAAGAGACAGATACAGAAGGAGCTGGAATTGCTTGCCAGCTTAAGGCATCGGAATTTGATGAGTTTGCGGGCCTATGTTCGTGAACCTGATAGTTTTTCCTTGGTTTATGATTATGTACCAACGGGGAGCCTTGCGGATATAATGAATAGATTTAAGGAAAGTGGGTTGCCGCTTGGCTGGGAGGTTCGGCTTCGGATTGCTGTTGGTATGGTTAAGGGACTTCGCTATCTTCATTTCACATGTGTACCTCAGATACTACACTATAACTTAAAGCCCACAAATGTCATGTTGGATGCGGAGTATGAACCCAGATTGGCTGATTATGGATTGTCTACTCTTCTACCCAACTTAGATAGAGCTACATCAGCTTACAGTCCTCCTGAATGTTTCCACAATTGCAGCAGATACACCGATAAAAGTGACATCTTCAGTTTTGGTATGATACTGGGTGTTCTTTTAACCGGCAAGGATCCTACAGATTCATTCTTTGGAGAAGCAGCCGGCGGGGGAAGTCTGGGATGTTGGCTACGACACTTGCAGCAAGCAGGTGAACTAAAGGAAGCACTTGATAAGAGTATTCTGGGAGAAGAAGGGGAGGAAGACGAGATGCTAATGGCTGTCAGAATTGCTGCAGCATGCCTCTCTGATATGCCTGCAGACAGGCCTTCCAGTGATGAGCTCGTTCACATGCTAACCCAACTGCATAGTTTTTG 1196 0.4457 MFKKRYILSYLIKEICNSLLLFLLSLHYTTVQCQGRLSQHMSSELPSPTGPSEYKNSLRKIILSIVLGVLTGLVGSVVFALLVRCFVQYLKRTPVLKGPVIFSPKIAPKTLQSALAKENHLLGSSPNGKYYKTVLDNGLTIAVKRLTPFESGSPETRRKSVKRQIQKELELLASLRHRNLMSLRAYVREPDSFSLVYDYVPTGSLADIMNRFKESGLPLGWEVRLRIAVGMVKGLRYLHFTCVPQILHYNLKPTNVMLDAEYEPRLADYGLSTLLPNLDRATSAYSPPECFHNCRYTDKSDIFSFGMILGVLLTGKDPTDSFFGEAAGGGSLGCWLRHLQQAGELKEALDKSILGEEGEEDEMLMAVRIAAACLSDMPADRPSSDELVHMLTQLHSF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00098 397 CDD STKc_IRAK 122 394 - -
Bva05g00098 397 Coils Coil 158 178 - -
Bva05g00098 397 Gene3D Transferase(Phosphotransferase) domain 1 200 396 - -
Bva05g00098 397 ProSiteProfiles Protein kinase domain profile. 116 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00098 397 Gene3D Phosphorylase Kinase; domain 1 105 199 - -
Bva05g00098 397 SUPERFAMILY Protein kinase-like (PK-like) 119 391 IPR011009 -
Bva05g00098 397 Pfam Protein kinase domain 118 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00098 397 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 18 397 - -
Bva05g00098 397 PANTHER - 18 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00098 Bva-Chr5 494021 496943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00098 62 394 Receptor kinase-like Gene Family AT2G31880 34.463 1.85e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Bva05g00098 Pkinase 3.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00098 - - gmx:102664273 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00098 05 494021 496943 Bva05g00098 05 494021 496943 ECH