Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00092 ATGACCATGGTTCCGGCTCACAATCTCTCGAAACAGGAACAGCAAGACCAAcctaagaaacaaaaacatgaCGGCAGCGGTTATGGTGGCGGATATGAGACAGAAACGACAGAGAGTATCAGTGGAAGTGGAATTGTTATTAACCGGTTTGAAGGGTATAATTGGAGTGAATATTGCTTAGGATCTGGTTTCGGAGTCAGCCACCATAGCCACATGGCTGAGGAAGAATCAACAAGTAATAGTTTTAACGAAGCAGCTGGGTCCAGCGCCTCCAAGGTTGAAGAAGGTCAGCAAGATAATAAGGAGAAACCATGGCTGAGCCTGCAATTAAGTATAGGTTGTCAAACGGCGTCCCCATCCATCTCCACCGACCACCACGGCAACCATGATCGTGATCCGACATTATTATTACCTCCACCAACAGCCTCAGCTTCAAGCTCTAGACTTGTGGAGCTGGACCTATCACCTGCTGGGACTGGGGCGGCCCATTCCCTTTCGCTGTCCCCTCTAGTTTCAGGCAAGTTGCCTGAAACTAGAGGAGGTTCACCGAGGACGTTTTTGTGCTATCCAGCATCAACATCAGCTAGTGGAGCTTCGATTTTTCAACAGCAAACCACAATTAGCGGTCCAAGCTTCGCTCAGAATCAAGAGATAAACTGGGCATTTGGTCCAGTCCACCATACTATGGGACTAATgcattcatcttcttctttgagGCCACATCTACCTCTAGGATCTTATTTTCCGAGGCCTCTACAATTCCCTGCTGCTTTTGATGTTGCAGGGCCAAGCTCTTCCTCTTCCGACATTAGAGTTGTTGATCCTCCTCGGAGACCTCATTCTGGAATATGGTTTATGCTACAAGCCTCCCACAATCAAGCAAAAGATCCATTCTTGCCTCAAATACCTAAGAGCTACCTCAGAATCAAGGATGGAAGGATGACAATTCgattattaatgaaatatttggtTAACAAGCTCAAACTGGACAGCGAATCTGAGATAGAGATAACATGCAGAGGGCAGCAACTCCTACCTTTCTTGACGTTGCAGCATGTAAGAGACAACATATGGACATCCGGTCACGGGGACAGAGCTATGACTTTGTTTTCGGAATCATCGTCGACCACAAATCTTAATCATATAATGGTGCTCCAATATGGTAGAAGAAGCGCTTG 1178 0.4465 MTMVPAHNLSKQEQQDQPKKQKHDGSGYGGGYETETTESISGSGIVINRFEGYNWSEYCLGSGFGVSHHSHMAEEESTSNSFNEAAGSSASKVEEGQQDNKEKPWLSLQLSIGCQTASPSISTDHHGNHDRDPTLLLPPPTASASSSRLVELDLSPAGTGAAHSLSLSPLVSGKLPETRGGSPRTFLCYPASTSASGASIFQQQTTISGPSFAQNQEINWAFGPVHHTMGLMHSSSSLRPHLPLGSYFPRPLQFPAAFDVAGPSSSSSDIRVVDPPRRPHSGIWFMLQASHNQAKDPFLPQIPKSYLRIKDGRMTIRLLMKYLVNKLKLDSESEIEITCRGQQLLPFLTLQHVRDNIWTSGHGDRAMTLFSESSSTTNLNHIMVLQYGRRSA 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00092 392 PANTHER RING FINGER PROTEIN 1 390 IPR044171 GO:0007275
Bva05g00092 392 Gene3D - 277 370 - -
Bva05g00092 392 MobiDBLite consensus disorder prediction 71 101 - -
Bva05g00092 392 MobiDBLite consensus disorder prediction 1 38 - -
Bva05g00092 392 MobiDBLite consensus disorder prediction 76 94 - -
Bva05g00092 392 PANTHER RING FINGER PROTEIN 1 390 - -
Bva05g00092 392 MobiDBLite consensus disorder prediction 117 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00092 Bva-Chr5 460447 468108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00092 298 355 C3H Transcription Factor Family AT3G23060 41.379 1.89e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00092 - - pvy:116137920 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00092 05 460447 468108 Bva05g00092 05 460447 468108 ECH