Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00080 ATGGGTTGTTTTTCGTGTTTTGATTCGAAGGAGGATGAGAAGCTCAATCCTCAGCAGGAAACCGATGATCGTAAGCAAGGACATCCAATGGTCCCTCCTAACATCTCCAGATTGCCCTCAGGAGCAGACAAGCTTCGATCAAGAAGTAATGGAGGTTCCAAAATGGAGTTGCCTGCTCCCAAGGATGGGCCCGGTGTCCAAATTGCTGCTCAAACTTTTACTTTCCGTGAGCTTGCAGCAGCAACTAAGAACTTCAGACCCGAGTCTTTTTTAGGTGAAGGAGGTTTTGGAGGAGTATACAAAGGGCGCCTGGAAAGCACGGGTCAGATTGTCGCTGTGAAACAGCTAGATAGAAACGGTCTTCAGGGTAATAGGGAATTCCTAGTAGAGGTTCTCATGCTCAGCCTTCTACATCACCCTAACTTGGTGAATCTGATTGGTTATTGTGCTGATGGAGACCAACGCCTCCTTGTTTATGAGTTTATGGCACTGGGGTCATTGGAGGATCATCTTCATGATCTTCCTCCTGATAAGGATCCACTAGATTGGAACACTAGGATGAAGATAGCTGCTGGTGCTGCAAAAGGATTGGAACACCTGCATGACAAGGCAAATCCTCCAGTCATATACAGGGATTTCAAGTCATCAAACATATTACTAGATGAAGGATTTCATCCAAAGCTTTCTGATTTTGGTCTTGCAAAGCTTGGCCCTGTTGGTGACAAGTCACATGTTTCTACCAGGGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCCATGACTGGACAACTGACAGTAAAGTCTGATGTCTATAGCTTTGGTGTAGTTTTCCTAGAACTAATTACTGGACGGAAAGCTATTGACAGCACCCGACCCCATGGAGAACAAAACCTTGTCACATGGGCACGTCCGTTGTTCAATGACCGCAGGAAGTTTTCAAAATTGGCAGATCCGCAGCTGCAGGGGCGGTTTCCCATGCGGGGTCTCTACCAGGCTCTTGCAGTGGCATCGATGTGCATCCAAGAACAGGCTGCCACACGTCCTATGATTGGGGATGTGGTGACAGCTCTCTCGTATCTGGCCAACCAGGCTTATGACCCTAACACAGCGGGGCATGGTCATAGCCAGAGGGGTTCTGGTGATGATAAAAGGAACAGGGACGATAGAGGTAGTAGGAtattgaaaaatgatgaagGTGGAGGGTCTGGACGCAGATGGGAGTTGGAAGGATACGAGAAAGATGAGTCTCCTCGAGAAACCGCAAGGATGTTAAACAGGGATATAGATAGAGAACGTGCTGTGGCTGAAGCGAAGATGTGGGGAGAGAACtggagagaaaagagaaggcAGAGTGTGCAGGGCAGTTTTGATGGGTCTAATGCCTA 1391 0.4673 MGCFSCFDSKEDEKLNPQQETDDRKQGHPMVPPNISRLPSGADKLRSRSNGGSKMELPAPKDGPGVQIAAQTFTFRELAAATKNFRPESFLGEGGFGGVYKGRLESTGQIVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMALGSLEDHLHDLPPDKDPLDWNTRMKIAAGAAKGLEHLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPQLQGRFPMRGLYQALAVASMCIQEQAATRPMIGDVVTALSYLANQAYDPNTAGHGHSQRGSGDDKRNRDDRGSRILKNDEGGGSGRRWELEGYEKDESPRETARMLNRDIDRERAVAEAKMWGENWREKRRQSVQGSFDGSNA 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00080 463 Gene3D Phosphorylase Kinase; domain 1 69 161 - -
Bva05g00080 463 PANTHER SERINE/THREONINE-PROTEIN KINASE PBS1 1 458 - -
Bva05g00080 463 Gene3D Transferase(Phosphotransferase) domain 1 162 378 - -
Bva05g00080 463 Pfam Protein kinase domain 88 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00080 463 MobiDBLite consensus disorder prediction 367 463 - -
Bva05g00080 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bva05g00080 463 SUPERFAMILY Protein kinase-like (PK-like) 68 359 IPR011009 -
Bva05g00080 463 CDD STKc_IRAK 91 359 - -
Bva05g00080 463 PANTHER OS07G0668900 PROTEIN 1 458 - -
Bva05g00080 463 MobiDBLite consensus disorder prediction 7 27 - -
Bva05g00080 463 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Bva05g00080 463 MobiDBLite consensus disorder prediction 378 454 - -
Bva05g00080 463 MobiDBLite consensus disorder prediction 1 64 - -
Bva05g00080 463 ProSiteProfiles Protein kinase domain profile. 85 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00080 Bva-Chr5 400179 405183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00080 1 451 Glycoside Hydrolase AT3G07070 56.182 2.26e-171 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Bva05g00080 Pkinase 2.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00080 K13430 - tcc:18608901 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00080 05 400179 405183 Bva05g00080 05 400179 405183 ECH