Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00078 ATGAAAATGGATGTGgtcaaaggaaaaggaaacaaaggTCTGATCACCAAGACATGGGAGCGATGCAAGTCCATTGGGCGCGGACACGGGAGCAAGAGTTTATCCAAGGCGGTGAGTAAGACTTTCCCTCTTAGTCAAACCAGGAGGAGCAAATCATGGCCTTCCCTTGATGCAAGGGCAGAActagaagaagagaaaagagggcGGCGAAAGGTGGCTCCCCAAGGCTGCTTCTCGGTCTACGTTGGACCCGAAAAGCAGAGGTTTGTGATCAAAACAGAGTATGCAAACCACCCTCTGTTCAGGATATTACTGGAAGAAGCAGAATTGGAGTATGGTTATAACAGCCAAGGCCCTCTAGCACTTCCTTGTGATGTTGATCTTTTTTGCAAGGTCTTGATGGAAATGGACAGTGGCAGCGAAGAAATCCCTTCCGGTTGTGCATTCGGCAAGCGTTATGGCTCTTATCACCTTCTAAGCCCATCTCCAGTGTTTGCCATAAATCGTTTATA 512 0.4395 MKMDVVKGKGNKGLITKTWERCKSIGRGHGSKSLSKAVSKTFPLSQTRRSKSWPSLDARAELEEEKRGRRKVAPQGCFSVYVGPEKQRFVIKTEYANHPLFRILLEEAELEYGYNSQGPLALPCDVDLFCKVLMEMDSGSEEIPSGCAFGKRYGSYHLLSPSPVFAINRL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00078 170 Pfam Auxin responsive protein 48 133 IPR003676 GO:0009733
Bva05g00078 170 PANTHER SMALL AUXIN-UP RNA-RELATED 10 142 - -
Bva05g00078 170 MobiDBLite consensus disorder prediction 27 58 - -
Bva05g00078 170 MobiDBLite consensus disorder prediction 34 53 - -
Bva05g00078 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 10 142 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00078 Bva-Chr5 390829 391341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00078 73 143 Calmodulin-binding Proteins AT5G20810 43.662 4.08e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00078 K14488 - qsu:112016936 207.223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00078 05 390829 391341 Bva05g00078 05 390829 391341 ECH