Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00077 ATGGCGTCTCCATTTACAACCTTGTCAAATGTCGGGTCGTTGCCGAGTCCACGAAGCGTCGCGATGCAGATGAGAGCTTTCAACCCTATGAGTAGTATTAGCTCAATCAAGCTCAGGGGATTATCTTCGCGGCCGAATTCGTGCTCCTCATCGAGCGCTTTCTCTGGTTCGTTGCTTCGGGagtcttctttttgtttgtcgAACCCTTCATCCCGGCAAAGAAAGGGGTTTTCCAGCTTCGTACGGGCCAGCTCCGAGgAAGCACCTTTACAATCGAAAGTTACTCATAAAGTATATTTTGACGTAAGCATTGGGAATCCAGTAGGGAAGCTTGCTGGAAGGATTGTGATTGGACTTTATGGTGATGATGTACCTCAGACGGCAGAGAACTTCCGTGCCATTTGTACAGGAGAGAAGGGTTTTGGGTACAAAGGCTCTGCATTCCATCGTGTAATAAAGGATTTTATGATTCAAGGAGGGGACTTCGACAAAGGAAATGGAACTGGAGGTAAAAGCATATATGGTCGCACTTTCAAAGATgagaattttaagtTGTCTCATATTGGACCAGGAGTTGTTAGCATGGCAAATGCCGGGCCCAATACCAATGGAAGTCAGTTTTTCATATGCACTGTCAAGACACCATGGCTGGACCAGAGGCATGTTGTATTTGGCCAAGTTTTGGAAGGTATGGACATTGTTAGGTTGATTGAATCTCAGGAGACAGACCGAGGTGATCGTCCGAGAAAGAAGGTGGTTATCAGTGACTGTGGAGTTCGGTACCTTTCTTTTTCCGCACTGAAGAGAAAAGTTTATGCGGCTATCTGTATTCTAGTAGAAATATCGTCTGAATGGACATG 860 0.443 MASPFTTLSNVGSLPSPRSVAMQMRAFNPMSSISSIKLRGLSSRPNSCSSSSAFSGSLLRESSFCLSNPSSRQRKGFSSFVRASSEEAPLQSKVTHKVYFDVSIGNPVGKLAGRIVIGLYGDDVPQTAENFRAICTGEKGFGYKGSAFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHIGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQETDRGDRPRKKVVISDCGELPVA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00077 263 Gene3D - 85 263 IPR029000 -
Bva05g00077 263 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 43 260 - -
Bva05g00077 263 CDD cyclophilin_ABH_like 96 258 - -
Bva05g00077 263 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 5, CHLOROPLASTIC 43 260 - -
Bva05g00077 263 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 112 258 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 SUPERFAMILY Cyclophilin-like 90 260 IPR029000 -
Bva05g00077 263 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 109 259 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 160 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 206 218 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 191 206 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 219 234 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
Bva05g00077 263 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 143 160 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00077 Bva-Chr5 384970 388148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00077 113 254 U-box Gene Family AT5G67530 48.951 6.00e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00077 K03768 - zju:107417611 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00077 05 384970 388148 Bva05g00077 05 384970 388148 ECH