Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00075 ATGGCAGAGAACAAGTCTGCAGAAATCAAGGACTTTCAAATTATGATCGCGAACAAGGAGGATGATAAGAAACAATTAGCACCAAAGAGAGCTTCCAACAAGGACCGGCACAAAAAGGTTGATGGTAGAGGCAGAAGAATAAGGATGCCAGTTCTATGTGCCGCCAGGGTATTCCAATTGACCAGAGAATTGGGTCACAAGTCTGATGGAGAAACAATTCAATGGCTTTTGCAACAAGCAGAACCCTCGATATTTGCAGCAACTGGTACAGGAACTATCCCAGCCTCAGCTCTTGCAGAAGCAGGGGTCTCTGTTTCTGAACAGAGAATCTCTGTGTCTGCTGGTTTGCACTCAAAGATGGAATCTTTGGGGTCAAGTCCTAGGTATGAAGGTAGGCCCAACTGGGCAAAGATGAATGGAAATCTTGCCAGACCACTCGTACAAAGTGGGGTTTGGCCAAATCTAAGTGGAATCGGGTCAGGGGTCCTCCAGAACTCTGGGTTTTTGACTTGTTATTCGGCAAACGAGTCAAACAACTTACCCAAATTTGGATTCCCCAGTTTTGAATCTCCTCATATGAATATGGGTCCAATGAGTTTATCCACAAATTTGGGTAGAGCCGACCAGCAAGTCCCAGGTTTAGAGCTAGGTCTATCGCAGGATGGTATTAGGATGTTAACTTCCGAAGCCATGGCCCAGTTCTACCAGCAACTTGGGCAGGGCAGAGATGGTGCTGGGTTGCTGAGTCGGCAACTTGAACCTATTCAGAAGGATGATTCTCAAGgatcaaaacaata 797 0.4567 MAENKSAEIKDFQIMIANKEDDKKQLAPKRASNKDRHKKVDGRGRRIRMPVLCAARVFQLTRELGHKSDGETIQWLLQQAEPSIFAATGTGTIPASALAEAGVSVSEQRISVSAGLHSKMESLGSSPRYEGRPNWAKMNGNLARPLVQSGVWPNLSGIGSGVLQNSGFLTCYSANESNNLPKFGFPSFESPHMNMGPMSLSTNLGRADQQVPGLELGLSQDGIRMLTSEAMAQFYQQLGQGRDGAGLLSRQLEPIQKDDSQGSKQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00075 265 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Bva05g00075 265 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 265 IPR005333 GO:0003700
Bva05g00075 265 MobiDBLite consensus disorder prediction 20 38 - -
Bva05g00075 265 Pfam TCP family transcription factor 32 117 IPR017887 -
Bva05g00075 265 Coils Coil 2 22 - -
Bva05g00075 265 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 1 265 - -
Bva05g00075 265 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00075 Bva-Chr5 377379 378533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00075 6 235 TCP Transcription Factor Family AT3G27010 52.282 5.46e-65 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva05g00075 TCP 8.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00075 - - jre:109018416 353.599