Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00069 ATGGATACTTCTTTCAACTCACAATTCAATCGTTTCAGAAGCTCGGCGAATTCATTCCTGTCGCAATTCGAGCCTCTCGTTCTGCTTCTCGCTCCTCTGCTTGCTCTCTTCCTCGCTCAGGCAATTCACTCTTTTTTCAAGCTTGTTCATGAAAATGGACTTAAAGCGACTCTCCTAGGATTTCTCATGAACTCCATCAaATTGATCCCTTTTGTGAAGAGTTACTTGGATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGATGGTAAATCTAAACGAGAAGGTTGGAGAACAGAGTTGCCAAGGGCAGGCCTAAGGACAGCAGTCcttgaaaaaatgaaagatgagaaaagaaatgatgtgATTTGGCAGGGCAAATGCTCTGGTACAGTCTACATCGGAGGCAGTGAATTGGATGGACACTTTTCTCTGATTAATGAGGCATGCTCAATGTTTGCACATACAAATCCTTTGCATTTGGATGTATTCCAGAGTGTTGTACGCTTTGAGGCAGAAGTTGTTGCGATGACAGCTGCACTTCTTGgaagtaaagaaaagagttcTGGGGGACAAATATGTGGAAACATGACATCAGGAGGAACTGAAAGCATATTATTAGCTGTCAAATCATCTCGCGACTACATGAAATCTAAGAAAGGAATTACAAGGCCTGAAATGATAATACCCGTCTCTGCACACTCAGCATATGACAAGGCTGCACAGTATTTCAATATCAAATTATGGCGCGTCCcagtaaacaaaaattttcaggGAGATATAAAAGCAATTCGACAgcatattaacaaaaatactaTCTTGATAGTTGGATCTGCCCCTGGGTTCCCTCATGGAATCATTGACCCCATTGAGGAACTTGGTGATCTGGCATCTAGGTTTGGAATTTGTCTCCACGTTGATCTTTGTCTTGGGGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGgtATACCATTCCaccttttgatttttctgtCAAAGGAGTATCTTCAATATCAGTGGACGTGCATAAATATGGTTTGGCTCCCAAAGGAACAAGTGTTGTTCTATACAGGAATCATGAAATCAGAAAGCATCAATTTGTTGCTGTTACTGAGTGGTCTGGTGGGTTATATGTGTCTCCAACCATTGCTGGAAGCAGGCCTGGAGGTCTCATCGCTGGGGCATGGGCGGCAATTATGTCTTTAGGGAAAGAAGGGTACTTGGAGAATACAAAAGCAATTATGGAAgtatcaaagaaaattcagaaagGCATAGAGGAGATTTCTGAGTTGTTTATTGTTGGAAGACCGGACATGACAATTGTGGCTTTTGGATCTGATGTTCTGGACATATTTGAAGTCAATGATATCATGTCATCCAAAGGGTGGCATTTGAATGCATTACAAAGACCCAACAGCATCCATATCTGTGTGACCCTGCAGCATGTGGCGGTCGTTGAAGAGTTTCTCAGTGATTTAAAGGAAGCTGTGAAAACTGTGAAAGAAAATCCTGGCCCAGTAAGTGGAGGACTAGCACCTATATATGGTGCCGCAGGAAAGATGCCAGATAGAGTTATGGTCCGGGAATTGTTGGTAGATTTCATGGATGGTACCTGCTA 1622 0.3995 MDTSFNSQFNRFRSSANSFLSQFEPLVLLLAPLLALFLAQAIHSFFKLVHENGLKATLLGFLMNSIKLIPFVKSYLDAEKQKVVDKLQSDGKSKREGWRTELPRAGLRTAVLEKMKDEKRNDVIWQGKCSGTVYIGGSELDGHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPVSAHSAYDKAAQYFNIKLWRVPVNKNFQGDIKAIRQHINKNTILIVGSAPGFPHGIIDPIEELGDLASRFGICLHVDLCLGGFVLPFARELGYTIPPFDFSVKGVSSISVDVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGGLIAGAWAAIMSLGKEGYLENTKAIMEVSKKIQKGIEEISELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVAVVEEFLSDLKEAVKTVKENPGPVSGGLAPIYGAAGKMPDRVMVRELLVDFMDGTC 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00069 540 Gene3D - 101 537 - -
Bva05g00069 540 Gene3D Aspartate Aminotransferase, domain 1 109 503 IPR015422 GO:0003824
Bva05g00069 540 PANTHER - 22 540 - -
Bva05g00069 540 SUPERFAMILY PLP-dependent transferases 80 504 IPR015424 -
Bva05g00069 540 Gene3D - 137 404 IPR015421 GO:0003824
Bva05g00069 540 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 22 540 - -
Bva05g00069 540 Pfam Pyridoxal-dependent decarboxylase conserved domain 152 445 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00069 Bva-Chr5 351770 358255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00069 156 496 Calmodulin-binding Proteins AT5G17330 25.208 5.38e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00069 K01634 - gmx:100794395 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00069 05 351770 358255 Bva05g00069 05 351770 358255 ECH