Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00066 ATGGTAGAATTTGACCTTCCTAGCGGGGCTATAAACAATGCGGAATTTGAGAGTATGAAAGACAAATTGGGACAAGTTGCACGTTCGATTAGTCAACCTTTACCCACTGCCGATGCTATATTCTACAAGGTGGCATTTCAAGAAGTTCCAAAGCTTGTAGCTGGTCgtaaagtatttataaatcaaGGTCGTTTCACTGGTAGCCGTACTGTTCGCAGTCAGCTATCAAAGGCACTAATCCTTACAAACAGAAAATGGACATCTACAATAAGAGAACAAGAGAAAGATAGGTTAACTCCTCTAAGTCTGGCTATTGTGGAAGCTCTGTATTCAAGTTATCTAGGCCCTGACTATTCTCAGCCAAGAGAATATGCTGAGATATCATTGAAGGATATTGATCTAGTTGCAAAGAGATCATTTCCTTTATGCATGCGTCACTTCCTTGAAAAGCTGAGAGAGAATCATCATTTAAAGCATGGAGGGAGGATGCAACTAGGTCTCTTTCTCAAGGTTCCATTCGTCTTCCCTTTTgagtatgaaaatattttaggcAGTTATAAGGGACACTGGTTGCATAATTCGTG 584 0.3853 MVEFDLPSGAINNAEFESMKDKLGQVARSISQPLPTADAIFYKVAFQEVPKLVAGRKVFINQGRFTGSRTVRSQLSKALILTNRKWTSTIREQEKDRLTPLSLAIVEALYSSYLGPDYSQPREYAEISLKDIDLVAKRSFPLCMRHFLEKLRENHHLKHGGRMQLGLFLKVPFVFPFEYENILGSYKGHWLHNS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00066 194 Gene3D - 1 103 - -
Bva05g00066 194 PANTHER DNA PRIMASE LARGE SUBUNIT 3 170 - -
Bva05g00066 194 PANTHER DNA PRIMASE LARGE SUBUNIT 3 170 IPR007238 GO:0006269
Bva05g00066 194 Pfam Eukaryotic and archaeal DNA primase, large subunit 41 170 IPR007238 GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00066 Bva-Chr5 337757 340013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00066 3 170 Core DNA Replication Machinery Family AT1G67320 54.460 2.55e-63 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00066 K02685 - gmx:100806321 248.825