Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00059 ATGAGTTTGCTACATGTAGTTGGGTTTGGTCTAAAGGTGGGGCATCTACTTTTGGTGCTATGTTGCTGGATAGTGTCTGTCATTTACATGAACTGGTTCATTAACAGTGGAATTATGGACACCAAGATTGGTATTGTTGGTAACGGTGCCAAGATGTGGATTAAATGGTGGGAGAAGATCTCTGGGAAGAGTTGTAAAATCCACCAACAATACTATCAGTATTTTGGGTCCAAGAGAGTGAAGAGAACGTTGTGGAGAAAGCTGCTGCTGACATGGGTGGTGGGTTGGGTAATAGTATCTTTGTGGATCTTCTGCTACATGAGCTTACAGGCTACAGAGAAGAGGAAAGAGACTCTGGCAAGTATGTGCGATGAGAGGGCTAGGATGCTGCAGGATCAGTTTAATGTCAGCATGAATCATATCCAAGCCATGTCCATTCTGATCTCAACCTTCCACCATGCCAAGAACCCTTCTGCTATCGATCAGAGAACATTTGCTAGGTATACAGAAAGAACTGCTTTTGAGAGGCCCCTTACAAGTGGTGTTGCGTATGCTGTAAGGGTGCTCCATTCTGAAAGGGAACAATTCGAGAAGCAACAAGGATGGACTATTAAGAGGATGGATACCATGGAGGAGAACCCGGTTCATAAGGACGAGTATGCCCCGGAGGCATTGGAGCCATCTCCGGTTCAGGAAGAATATGCCCCTGTCATCTTTGCACAGGATACAATTTCACATGTCATTTCTATTGATATGCTTTCTGGAAAGGAGGACCGTGAAAATGTGTTGCGCGCAAGAGAATCTGGGAAAGGGGTATTAACTGCTCCTTTCAAGCTGCTCAAAACGAACCGTCTGGGGGTTATCTTGACTTTTGCCGTGTACAAGACAGACCTTCCTTCAAATGCAACCCCAAATGAACGAATTCAGGCAACTGATGGGTATCTTGGTGGGGTTTTTGATATTGAGTCATTAGTGGAGAAATTACTTCAACAACTTGCTAGCAAGCAAACTGTAATTGTTAATGTGTATGATACTACTAATCATACACACCCAATTGCCATGTATGGTTCAAATGTAACAGATGGTGAGTTCCATCATGTCAGCACCCTTAACTTTGGAGATCCTTTCAGGAAGCATGAGATGCACTGCAGGTTTAAACAGAAACCACCGTGGCCATGGTTGGCAATAACTACTTCATTCGGAATCCTTGTTATCGCACTCCTTGTTGGGCATATTTTCCATGCTACTGTGAATCGAATTGCTAAAGTGGAGGATGATTACTGTGAGATGATGGAGCTTAAAAAGCGAGCAGAGGCAGCTGATGTTGCGAAATCCCAGTTCCTTGCTACTGTTTCCCATGAGATAAGAACGCCCATGAATGGTGTCCTAGGAATGCTGCATATGCTTATGGACACGGACCTAGATGTTACCCAGCAGGAATATGTCAGAACGGCACAGGGCAGTGGAAAAGCTCTAGTTTCACTTATAAATGAGGTTTTGGATCAGGCAAAGATTGAATCTGGCAAGCTAGAGCTTGAGGCAGTACTGTTTGACTTGCGGACAATTTTGGATGATGTATTGTCACTGTTTTCTGAGAAATCTCAAGAAAAAGGAGTAGagTTGGCAGTTTATATCTCAGATCAGGTTCCTGAAAAGCTAATAGGCGATCCTGGAAGGTTTCgacaaataattacaaaccTCATGGGTAACTCAATAAAGTTCACAGAAAAAGGACACATCTTCGTCACTGTCCATCTTGTTGAGGAGGTTGTTGACTCAATCGAAGTTGAGACAGAATCGACATCAAAAGATACCTTGAGTGGCTTTCCTGTTGCTGATAGACGGCGGAGTTGGGAAGGATTTAAGACTTTTAGTAAAGAGGGACCTTTTGGTGCTTTCTCATCCTCGTCTTCTGATCACATCAATTTAATTGTGTCTGTCGAAGATACGGGTGAAGGTATTCCTGTAGAAGCCCAATCTCGTATTTTTACTCCATTCATGCAGGTAGGGCCTTCCATCTCCCGGAAACATGGTGGAACAGGTATTGGGCTAAGCATTAGTAAGAGTTTGGTTGGCCTCATGAATGGGGAAATTGGATTTGTGAGCATACCCAAGGTTGGATCTACATTTACATTTACTGCTGTCTTTACCAATTCAAATAAGTGTCAAAGTCAGCAAATCATCAACCAACCAAACCCTGCATCCTCAGAATTTCAGGGCATGACTGCATTACTTGTAGACCCTAGACCCATTCGAGCTAAAGTATCAAGATATCACATTGAACGGCTTGGCATTCGTGTTGAAATAGCTTCAGATTTAAATCAAGGTTTGTCCACTATAGGCAATGGGACTATGGTTATTAATATGGTACTTGTGGAACAAGAGGTCTGGGATAGGAATTCAGGCATTTCATCTCACTTCATCCATAATCTGAGGAATATTGATTGTGGCGTTTCTCCAAAGCCGTTCCTACTTGCTAATTCTAGCAGGACAAATTCTGTAGCATGCGGTGCAGGAGCTTACAATCCTACAATCATCACAAAACCTCTAAGAGCAAGTATGCTTGCTGCCTCGCTGCAGCGAGCCATGGGTGTTGGGAGCAAGGGGAATCCTCGAAATGGGGAGCTTCCAAGCTTGTCTCTTCGCCATCTTCTGCGTGgaagaaaaatacttattGTAGATGACAACAGCGTGAACCTTACAGTAGCAGCTGGTGCTTTAAAAAAGTACGGAGCTGAAGTGGTTTGTGTTAACAGTGGAAAAGATGCCATCTCTTCGTTGAAGCCACCCCACCATTTTGATGCCTGTTTCATGGACATTCAAATGCCAGAAATGGATGGGTTTGAAGCTACTAGGAGAATCAGGGAGATGGAACACAGCGTGAGCAAAGGAGAAGTGTCCATGGAAGCCTTTGAGAATATTTCTCGCGGGCATCTACCAATTTTGGCCATGACTGCAGACGTGATCCAGGCGACACATGAGGAGTGCCTAAGATGTGGAATGGATGGATATGTTTCAAAGCCATTTGAAGCTGAACAACTTTATCGAGAAGTTTCACGCTCACATACGAgtgcatatataaatagattcACAAGTCTTCGAAAGAGGAGTGTACATAGGATAGGAGCCGAGTTTGGTTGGTTGGAAAAGAGTTTTAGTTTGATTGTTAGGGTCTCAAAACCCATCGATTTTTCCATGTA 3200 0.4306 MSLLHVVGFGLKVGHLLLVLCCWIVSVIYMNWFINSGIMDTKIGIVGNGAKMWIKWWEKISGKSCKIHQQYYQYFGSKRVKRTLWRKLLLTWVVGWVIVSLWIFCYMSLQATEKRKETLASMCDERARMLQDQFNVSMNHIQAMSILISTFHHAKNPSAIDQRTFARYTERTAFERPLTSGVAYAVRVLHSEREQFEKQQGWTIKRMDTMEENPVHKDEYAPEALEPSPVQEEYAPVIFAQDTISHVISIDMLSGKEDRENVLRARESGKGVLTAPFKLLKTNRLGVILTFAVYKTDLPSNATPNERIQATDGYLGGVFDIESLVEKLLQQLASKQTVIVNVYDTTNHTHPIAMYGSNVTDGEFHHVSTLNFGDPFRKHEMHCRFKQKPPWPWLAITTSFGILVIALLVGHIFHATVNRIAKVEDDYCEMMELKKRAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTDLDVTQQEYVRTAQGSGKALVSLINEVLDQAKIESGKLELEAVLFDLRTILDDVLSLFSEKSQEKGVELAVYISDQVPEKLIGDPGRFRQIITNLMGNSIKFTEKGHIFVTVHLVEEVVDSIEVETESTSKDTLSGFPVADRRRSWEGFKTFSKEGPFGAFSSSSSDHINLIVSVEDTGEGIPVEAQSRIFTPFMQVGPSISRKHGGTGIGLSISKSLVGLMNGEIGFVSIPKVGSTFTFTAVFTNSNKCQSQQIINQPNPASSEFQGMTALLVDPRPIRAKVSRYHIERLGIRVEIASDLNQGLSTIGNGTMVINMVLVEQEVWDRNSGISSHFIHNLRNIDCGVSPKPFLLANSSRTNSVACGAGAYNPTIITKPLRASMLAASLQRAMGVGSKGNPRNGELPSLSLRHLLRGRKILIVDDNSVNLTVAAGALKKYGAEVVCVNSGKDAISSLKPPHHFDACFMDIQMPEMDGFEATRRIREMEHSVSKGEVSMEAFENISRGHLPILAMTADVIQATHEECLRCGMDGYVSKPFEAEQLYREVSRSHTSAYINRFTSLRKRSVHRIGAEFGWLEKSFSLIVRVSKPIDFSM 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00059 1066 ProSiteProfiles CHASE domain profile. 156 382 IPR006189 -
Bva05g00059 1066 SMART REC_2 888 1018 IPR001789 GO:0000160
Bva05g00059 1066 CDD PRTases_typeI 842 917 IPR000836 -
Bva05g00059 1066 SUPERFAMILY CheY-like 885 1020 IPR011006 -
Bva05g00059 1066 SUPERFAMILY CheY-like 737 864 IPR011006 -
Bva05g00059 1066 PRINTS Bacterial sensor protein C-terminal signature 678 696 IPR004358 GO:0016310|GO:0016772
Bva05g00059 1066 PRINTS Bacterial sensor protein C-terminal signature 643 657 IPR004358 GO:0016310|GO:0016772
Bva05g00059 1066 PRINTS Bacterial sensor protein C-terminal signature 661 671 IPR004358 GO:0016310|GO:0016772
Bva05g00059 1066 SMART CHASE_2 156 357 IPR006189 -
Bva05g00059 1066 Pfam CHASE domain 159 355 IPR006189 -
Bva05g00059 1066 CDD REC_hyHK_CKI1_RcsC-like 890 1018 - -
Bva05g00059 1066 Gene3D CHASE domain 160 389 IPR042240 -
Bva05g00059 1066 SMART HKATPase_4 555 718 IPR003594 -
Bva05g00059 1066 ProSiteProfiles Histidine kinase domain profile. 450 718 IPR005467 -
Bva05g00059 1066 Gene3D - 878 1027 - -
Bva05g00059 1066 Gene3D - 107 159 - -
Bva05g00059 1066 PANTHER TWO-COMPONENT HISTIDINE KINASE 55 1022 - -
Bva05g00059 1066 CDD HisKA 443 504 IPR003661 GO:0000155|GO:0007165
Bva05g00059 1066 PANTHER HISTIDINE KINASE 3 55 1022 - -
Bva05g00059 1066 Pfam His Kinase A (phospho-acceptor) domain 443 508 IPR003661 GO:0000155|GO:0007165
Bva05g00059 1066 Gene3D - 507 722 IPR036890 -
Bva05g00059 1066 CDD HATPase_EvgS-ArcB-TorS-like 560 716 - -
Bva05g00059 1066 SMART HisKA_10 443 508 IPR003661 GO:0000155|GO:0007165
Bva05g00059 1066 Pfam Response regulator receiver domain 890 1017 IPR001789 GO:0000160
Bva05g00059 1066 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 642 716 IPR003594 -
Bva05g00059 1066 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 555 623 IPR003594 -
Bva05g00059 1066 Gene3D - 411 506 - -
Bva05g00059 1066 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 497 713 IPR036890 -
Bva05g00059 1066 ProSiteProfiles Response regulatory domain profile. 889 1022 IPR001789 GO:0000160
Bva05g00059 1066 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 429 509 IPR036097 GO:0000155|GO:0007165
Bva05g00059 1066 ProSiteProfiles Response regulatory domain profile. 742 863 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00059 Bva-Chr5 304989 310907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00059 1 1024 Miscellaneous Gene Families AT1G27320 70.757 0.0 1445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva05g00059 CHASE 3e-38 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00059 K14489 - gmx:100801546 1721.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00059 05 304989 310907 Bva05g00059 05 304989 310907 ECH