Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00050 ATGGCTTCCGCTTGTACTTCCTCCGCCATTGCAGCCATTGGCATCTCCTCCCCAAGTTCAAAGAAGAGTGGATCATGCTTTCTGAGTGGGAGGAAATTGAAGCTGAACAAGTTTAGAGGAGTTGCAGGTACTGGAGCACGATCCCTGAGCACAGTTTGCGTGGCAGCAGACCCAGACAGGCCTCTGTGGTTCCCAGGAAGCACCCCTCCTCCGTGGCTCGATGGCAGCCTCCCCGGAGACTTTGGCTTTGATCCTCTTGGTCTTGGATCTGATCCCGAGACCTTGAGATGGAACGTTCAATCTGAGCTTGTGCACTGCAGATGGGCAATGCTGGGAGCTGCTGGCATTTTCATCCCTGAATTCCTGACCAAGATTGGTATTCTAAATACCCCCTCTTGGTACAGTGCTGGAGAGCTGGAATACTTCACAGACACTACTACCCTCTTCCTTATTGAGCTCATTTTCATTGGGTGGGCTGAGGGTAGACGCTGGGCTGATATCATCAAGCCAGGCTGTGTCAACACCGACCCTATCTTTCCCAACAACAAGCTCACAGGGACCGATGTTGGGTACCCAGGTGGGCTTTGGTTTGACCCATTGGGCTGGGGGACTGGTTCTCCTGAGAAGATCAAAGAGCTGAGGACGAAAGAGATCAAGAATGGAAGATTGGCCATGTTGGCTGTCATGGGTGCCTGGTTCCAACACATTTACACCGGCACCGGTCCTATCGACAACCTCTTTGCCCATCTCGCAGATCCTGGCCATTCAACCATTTTTGCTGCTTTCACACCCAAGTG 797 0.5232 MASACTSSAIAAIGISSPSSKKSGSCFLSGRKLKLNKFRGVAGTGARSLSTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPETLRWNVQSELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFLIELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGTGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHSTIFAAFTPK 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00050 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Bva05g00050 265 SUPERFAMILY Chlorophyll a-b binding protein 55 263 - -
Bva05g00050 265 Pfam Chlorophyll A-B binding protein 69 235 IPR022796 -
Bva05g00050 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 265 - -
Bva05g00050 265 Gene3D Chlorophyll a/b binding protein domain 70 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00050 Bva-Chr5 258737 260352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00050 50 265 Chloroplast and Mitochondria Gene Families AT3G61470 89.352 4.15e-147 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00050 K08908 - gmx:100784089 475.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00050 05 258737 260352 Bva05g00050 05 258737 260352 ECH