Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00027 ATGGAAGAGGAAATCAAGGCAGAATTCAGAAAGAGCGGGTTTGATCtcgatgatgaagaagaaatatcAAAGAAATGTGTTCCCTTCTGCCTAAATTACAATGTCAAGCCTTCAGATCTCGTGTCAAGCTGGGAGGTTTATTATCTAAACAGACAGTTGAATGAGCCGATAGTACAAAATGCTGAAATGGATGGGTTCATGCTGCACCTACAGAATGAGCAAAAAGATGCTGTCAACAAGGAGAAAACTGATTTACATATTTACTCTACTAGAGATGAAGAAATGATCTTAAATAATGATGATGGTGATGATACAAAGGATAATATTCCTGGAACACCGACAGACCAACATCAAGATCTATATTCACATTCATATGATATGGCATCTTTATCAAGTGAGAATGTCTTATCTTCTAAAAAACCATCAAAACTTTTGACACCATTTGCAAAGCGAACGGATAGATTTGTGGTAAGATTTACCATAGATACAGTGCCGAATGTGgagaatggaaaagaagaTGGTCATGAGAATGATGAGGATGATATTGTCCGGAAGGTTAAACCTAGCAAAAGGTGCTCCTTGGTGGTTCGTGGATCAGGACCCAAGCCAGGTTGTAGATTCATGTATGATAGGACAGAAGATAGGTTTAATGCATTAGACAATCGAATTAGAAAGTATACAAGGGCGCTTGTCTCTTCTGGGCTTTATGAAGAACCGATGGACCCTACAATTGCCTCGCAGAAAAGCGTTTTTACTGTTGGCATGATTTGTTGTGATGGAGAAGGCCGTCTAAATGAGAAGTCGATTATGTTGCAGAGCAGTTTTGAGCATTCTGGAGGGCAACGTGTTCGCCTAGAGTTACAGCAACTAAgccatttttcaattttcccaGGCCAGGTAGTTGGTGTTGAAGGAAACAATCCAAGCGGACACTGCTTAATTGCATCAAAATTGGTGGACTCCTTACCTTCCTCCATTGTCGATGATGAGAATTTGAATCCTGCAAAGAAGCTAGCTTTAGACAGggaaaatcatccaactaatcTGTCGTGTGCGGAGAGGGAGCTATCAATGATTATTGCCACGGGCCCTTTTACTACAACAGACAACTTGTTGTTTGAACCTCTTGCGGAACTGCTGGCATATGCAAAGATGAGACAGCCACAATTGATTATATTGcTAGGACCGTTTATTGATACTGAACACCCTGACATTAAGACAGGAACCATAGATAGGagctttaatgaaatatttcatttggAGATCCTGAGAAGGTTGCAAGACTTTGTAGAGTGTATGGGCTCTTCACGTGTCATTCTTGTACCATCTATAAGGGATGCGAACCATGATTTTGTTGTCCCTCAGCCTGCATTTGACATCAATCTACCTGATCTCACATCTCAGaTTGCTAGTGTCCCTAATCCGGGAATCCTTGAGGCAAATGAGGTCAAGATTGGTTTCTGCGCTGTGGATATTCTCAAGCAGCTCAGTGGGGAGGAGATATCGCGAATTGCTGCTGATGGAAAACCCAGTGATCGCATGAGCAGACTTGCAAATCATATTCTTAGCCAACAAAGCTTTTATCCTCTTTATCCACCGGCAGAAAGTGTCCCTTTGGACTTTTCTCTTGCTCCAGAAGCTCTTGAACTGTCGTCGATTCCGGACATTCTCATCCTACCGTCGGACATTAAACACTTCATCAAGGTGCTATCAAATGAAGAGGGGAACCGAGGGAAGTGTCTTTCTGTTAATCCTGGAAGACTAGCCAAGGGTGAAGGAGGGGGTACTTTTGCTGAGATTGACTACCATGGGGCTCCTGACAAAATAAATGCTTCAATTCTTGGCATATG 1850 0.4016 MEEEIKAEFRKSGFDLDDEEEISKKCVPFCLNYNVKPSDLVSSWEVYYLNRQLNEPIVQNAEMDGFMLHLQNEQKDAVNKEKTDLHIYSTRDEEMILNNDDGDDTKDNIPGTPTDQHQDLYSHSYDMASLSSENVLSSKKPSKLLTPFAKRTDRFVVRFTIDTVPNVENGKEDGHENDEDDIVRKVKPSKRCSLVVRGSGPKPGCRFMYDRTEDRFNALDNRIRKYTRALVSSGLYEEPMDPTIASQKSVFTVGMICCDGEGRLNEKSIMLQSSFEHSGGQRVRLELQQLSHFSIFPGQVVGVEGNNPSGHCLIASKLVDSLPSSIVDDENLNPAKKLALDRENHPTNLSCAERELSMIIATGPFTTTDNLLFEPLAELLAYAKMRQPQLIILLGPFIDTEHPDIKTGTIDRSFNEIFHLEILRRLQDFVECMGSSRVILVPSIRDANHDFVVPQPAFDINLPDLTSQIASVPNPGILEANEVKIGFCAVDILKQLSGEEISRIAADGKPSDRMSRLANHILSQQSFYPLYPPAESVPLDFSLAPEALELSSIPDILILPSDIKHFIKVLSNEEGNRGKCLSVNPGRLAKGEGGGTFAEIDYHGAPDKINASILGI 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00027 616 Pfam DNA polymerase alpha/epsilon subunit B 359 568 IPR007185 GO:0003677|GO:0006260
Bva05g00027 616 Gene3D - 1 66 IPR043034 -
Bva05g00027 616 MobiDBLite consensus disorder prediction 96 117 - -
Bva05g00027 616 PIRSF DNA_pol_alpha_2 1 611 IPR016722 -
Bva05g00027 616 MobiDBLite consensus disorder prediction 96 110 - -
Bva05g00027 616 Coils Coil 209 229 - -
Bva05g00027 616 Gene3D - 339 503 - -
Bva05g00027 616 Gene3D - 509 612 - -
Bva05g00027 616 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 1 614 IPR016722 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00027 2 616 Core DNA Replication Machinery Family AT1G67630 58.871 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00027 K02321 - gmx:100797769 877.085