Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00025 ATGTATTTATCGGAAAAACCTCGTCCTATCGATTTCTACAAAGAAGAAGGTAGCAGAGATATGATTATTGAAGTTGTCTCAAATGGCGAGCTAGCACCACCACACCAACAAGCTGCTCAGCATCAAATGATCGTGGGTGATAGCAGCGGGGAAGACCATGAGGTTGAGATTAAGGCACCCAAGAAGCGTGCTGAAACTTGGGTACAGGACGAGACAAGAAACTTGATTGCCCTTCGTCGCGACATGGATGGTCTATTTAACACTTCCAAATCTAACAAACACTTGTGGGAACAAATATCAGCCAAAATGAGAGAGAAGGGATTCGATCGCTCCCCAACTATGTGCACAGACAAATGGAGAAATTTGTTAAAGGAGTTCAAGAAGGCTAAGCACCAAGACAGGGGAAGTGCGTCTGCCAAGATGTCCTATTACAAGGAGATTGAGGAGATTCTCAGAGAGAGGAGTAAGAGTGTACAGTACAAGAGCCCTACTCCTCCGAAGGTTGATTCCTTTATGCAATTCGCAGATAAAGGTATTGAGGATGCTAGCATCTCTTTTGGGCCAGTTGAAGCTACTGGTAGACCAACACTCAATCTTGAGAGACGTCTTGATCATGATGAACATCCTCTTGCCATCACTGCAGCTGAAGCCGTTGCAGCAAGTGGAGTTCCACCTTGGAATTGGAGAGAAACCCCTGGAAGTGGCGGGGAGGGTCAATCATGTTGTGGGAGAGTTATATCAGTCAAATTGGGTGATTATACTCGGAGAATAGGCATTGATGGCACTTCAGAAGCCATCAAGGAGGCAATAAGGGCTACTTTTAGGTTGAGAACCAAACGTGCATTTTGGTTGGAAGATGAAGACCAGATAATCAGAAGTTTTGACCGTGACATGCCTTTAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCAATTAAAGTATGCCTTTATGATGAGTCTGACCACATCCCCGTGCATACTGAAGACAAGATATTTTACACTGAAGATGATTACCGTGATTTTCTGACTCGCCGTGGCTGGACATGTCTAAGGGAATTTGATGGCTATAGAAACATTGATAATATGGATGATCTTCAGCCCGGTGCCATATACCGTGGGGTGAGTTG 1130 0.446 MYLSEKPRPIDFYKEEGSRDMIIEVVSNGELAPPHQQAAQHQMIVGDSSGEDHEVEIKAPKKRAETWVQDETRNLIALRRDMDGLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGSASAKMSYYKEIEEILRERSKSVQYKSPTPPKVDSFMQFADKGIEDASISFGPVEATGRPTLNLERRLDHDEHPLAITAAEAVAASGVPPWNWRETPGSGGEGQSCCGRVISVKLGDYTRRIGIDGTSEAIKEAIRATFRLRTKRAFWLEDEDQIIRSFDRDMPLGNYTLHLDEGMAIKVCLYDESDHIPVHTEDKIFYTEDDYRDFLTRRGWTCLREFDGYRNIDNMDDLQPGAIYRGVS 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00025 376 Pfam Myb/SANT-like DNA-binding domain 66 150 IPR044822 -
Bva05g00025 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 5 375 - -
Bva05g00025 376 CDD GT1 65 130 - -
Bva05g00025 376 Gene3D - 67 129 - -
Bva05g00025 376 PANTHER - 5 375 - -
Bva05g00025 376 SMART sant 63 125 IPR001005 -
Bva05g00025 376 ProSiteProfiles Myb-like domain profile. 59 123 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00025 Bva-Chr5 122348 126194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00025 1 375 Trihelix Transcription Factor Family AT3G25990 68.557 0.0 526
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bva05g00025 Myb_DNA-bind_4 5.2e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00025 - - ccaj:109807736 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00025 05 122348 126194 Bva05g00025 05 122348 126194 ECH