Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00020 atggatttattttctctcttcgtGCTTGTGCCTATATTTTCTCTCGTAACACCGTCTGCGGTTTGCCAAGTCCAAGAGTTTGTCAGCATAGACTGCGGAGGGACAAGTAATTATACTGATATTCATACGGGGCTGGCATGGATTACGGACTCCGGAATCATGAGTCATGGCTCTCCAGTGAGAGTAGAAAATCCAAATGGAAACAAAGCGCAGTATCAAAGACGCCGAGACTTCCCCGTAGACAGCAAGAAATACTGTTACACTCTGAGCACCCAAGAGAGGAGAAGATATCTGGTAAGAGCAACATTTCAGTATGGCAGCTTGGAAAATGGGGACACTTACCCTCAGTTTCAGATTTACTTGGATGCAACTAAATGGGCCACTGTGTCAATATCGGATGCTTCGAGAGTTTATGTAGAGGAAATGATCATCCGGGCACCCTCTAATTCTATCAGTGTGTGCATGTGCTGTGCTACCACTGGTTCTCCCTTCATATCAACTCTCGAGCTGCGACCCTTGAATCTTTCCATGTATGCCACAGATTACGAGGacaatttcttcttaaaaGTAGCTGCAAGAATCAATTTTGGTGCTCCAAGCGAGGATGCAATCAGGTACCCAGATGATCCGTATGATAGATTTTGGGAGTCAGATCTTATAAGAAGGCAAAATTATCTAGTTGGGGTAGCCCCGGGCACAGAGAGAATTAATACAACAAAAAACATAGGAATAGGGACAAAAGAATGCCCGCCTGTCAAAGTCATGCAAACAGCAGTTGTGGGCACAAAAGGAGTACTCAGTTATAGATTGAACCTGGAAGATTTCCCTGCCAATGCTCGAGCTTTCGCATACTTGGCTGAGATTGAAGATCTGGGTAAGAATGAAACTcgaaaattcaaaatgcagCAACCTTATATGGCTGACTACAGCAATGCAGTGGTTAACATAGCTGAGAATGCCAATGGGAGCTACACTCTTTATGAACCTAGTTACATGAATGTGACTCTGGAATTTGttctatcattttcctttgttaAGACCCGGGATTCTACTCGTGGACCACTTTTAAATGCAATGGAAATAAGTAACTATGTACAGATTGCACCGAAGACTGACAAGCAAGACTCGGCTGTTGTCAGTGCATTCAGCTTCACGTCTGCTCAAAGTGTTGAGATGAATGAGGGTGATCCTTGTGTTCCAACACCCTGGGAGTGGCTGAAATGTAGTTCCATTCTTCCGCCCAGAATCACAAAAATTAACCTGTCAAGGAGGAATCTCAAGGGTGAAATCCCACCTGAGCTCACCAACATGGAAGAATTGATGGAGTTGTGGTTAGATGGAAACTCTCTTACAGGACCACTACCTGACATGAGCAACCTTGTCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACTGGTCCACTACCATCTTACCTGGGTAGTTTGCCAAGCTTGCAAGCACTGTTCATACAGAATAACTCGTTTATTGGGGAGATACCTTCAGGATTACTATCTGGAAAACTCATTTTCAACTATGACGGTAATCCTGGACTGCATAAAGGGAACAAGAAGCATTTTAAGTTGATAATGGGAATTTCAATTGGGGTGCTAGCAGTTCTATCAATATCATTCTTTGCAAGTTTAGTGCTATTGCATAATCTTCGGAGAAAGAAAGCTCAACAAAAGTTGGATGAAAAGGGTATTTCTGGTTGCATTGGCAGTAAGCCATTGACTGCGTACTCATTAGTCAGGGGTGGGAATTTAATGAATGAAGGTACAGCTTACTATATTGCACTCTCAGAGTTGAAAGAAGCtacaaatgatttttcaaagaaaataggCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAAATGAGAGACGGAAAAGAGGTGGCTGTTAAGATAATGACTGATTCATCCAGCCATGGGAACCATCAATTTGTGACTGAGGTAGCCCTTCTGTCAAGAATTCATCACAGAAATTTGGTTCCTTTGATTGGATATTGCGAAGAAGAATATCAGCATATTCTGGTGTACGAGTACATGCACAACGGCACCTTACGCGATCACATTCATGGTTCTGCCACAAAGAAGCACTTGGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTCTCGATTACTTACACACTGGATGCATTCCTAGTATCATTCACCGAGATGTAAAGACAAGTAATATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGATTTTGGACTGTCAAGACTAGCTGAAGAAGATTTAACCCATATATCAAGTGTTGCACGAGGAACTGTAGGTTATCTGGATCCTGAATACTATGCAAATCAACAACTGACAGAGAAGAGTGACGTATATAGTTTTGGAGTTGTTTTACTGGAACTATTATCTGGTAAAAAGGCGGTATCCTCCGAAGATTATGGAGCGGAAATGAATATCGTCCACTGGGCAAGGAGCTTGATTCGTAAAGGGGACGTGATGAGCATTATGGATCCGTGTCTAGTTGGAAAAGTGAAAAGTGAGTCTATGTGGAGAGTAGCTGAAATTGCCATGCAATGTGTAGAACAACACGGTGCCTGCAGGCCAAGGATGCAAGAAATCGTTTTGGCCATACAAGATGccatcaaaattgaaaagggaACAGAGAATACTAAGGCACAGACTCTACTCCAGATTCGCCTCGTCTCATCTCATATCATCATAGGAAAAAACGGAACCGCGTTCTTATCCGGCATTTACTCCCTGGCCATAAGAGCCAAACTCAGCCAAGCCAACAGTCATATCCAGAGCCGGCCCTACCCCCATAGAAGCAAGGGTTGGGTTGAAGAGCCATCGATTGCTTATTCTTCTGCTTTTCGGTTAAGATTAGGGTCCTCGAGATTGAATTG 2912 0.4159 MDLFSLFVLVPIFSLVTPSAVCQVQEFVSIDCGGTSNYTDIHTGLAWITDSGIMSHGSPVRVENPNGNKAQYQRRRDFPVDSKKYCYTLSTQERRRYLVRATFQYGSLENGDTYPQFQIYLDATKWATVSISDASRVYVEEMIIRAPSNSISVCMCCATTGSPFISTLELRPLNLSMYATDYEDNFFLKVAARINFGAPSEDAIRYPDDPYDRFWESDLIRRQNYLVGVAPGTERINTTKNIGIGTKECPPVKVMQTAVVGTKGVLSYRLNLEDFPANARAFAYLAEIEDLGKNETRKFKMQQPYMADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVKTRDSTRGPLLNAMEISNYVQIAPKTDKQDSAVVSAFSFTSAQSVEMNEGDPCVPTPWEWLKCSSILPPRITKINLSRRNLKGEIPPELTNMEELMELWLDGNSLTGPLPDMSNLVNLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFIGEIPSGLLSGKLIFNYDGNPGLHKGNKKHFKLIMGISIGVLAVLSISFFASLVLLHNLRRKKAQQKLDEKGISGCIGSKPLTAYSLVRGGNLMNEGTAYYIALSELKEATNDFSKKIGKGSFGSVYYGKMRDGKEVAVKIMTDSSSHGNHQFVTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHGSATKKHLDWLARLRIAEDAAKGLDYLHTGCIPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELLSGKKAVSSEDYGAEMNIVHWARSLIRKGDVMSIMDPCLVGKVKSESMWRVAEIAMQCVEQHGACRPRMQEIVLAIQDAIKIEKGTENTKAQTLLQIRLVSSHIIIGKNGTAFLSGIYSLAIRAKLSQANSHIQSRPYPHRSKGWVEEPSIAYSSAFRLRLGSSRLN 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00020 970 SMART serkin_6 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00020 970 CDD STKc_IRAK 615 876 - -
Bva05g00020 970 Gene3D Phosphorylase Kinase; domain 1 588 684 - -
Bva05g00020 970 PANTHER - 21 913 - -
Bva05g00020 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Bva05g00020 970 SUPERFAMILY L domain-like 400 506 - -
Bva05g00020 970 Pfam Protein tyrosine and serine/threonine kinase 611 876 IPR001245 GO:0004672|GO:0006468
Bva05g00020 970 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Bva05g00020 970 SUPERFAMILY Protein kinase-like (PK-like) 597 877 IPR011009 -
Bva05g00020 970 PANTHER OS07G0107800 PROTEIN-RELATED 21 913 - -
Bva05g00020 970 Gene3D Ribonuclease Inhibitor 373 518 IPR032675 -
Bva05g00020 970 Pfam Malectin-like domain 30 362 IPR024788 -
Bva05g00020 970 ProSiteProfiles Protein kinase domain profile. 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g00020 970 Gene3D Transferase(Phosphotransferase) domain 1 685 904 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00020 Bva-Chr5 93609 98700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00020 15 891 Receptor kinase-like Gene Family AT1G67720 69.966 0.0 1274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Bva05g00020 Malectin_like 3.3e-86 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00020 - - aprc:113850330 1497.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00020 05 93609 98700 Bva05g00020 05 93609 98700 ECH