Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00015 ATGGCTACCCTGTCGCAGTGCGGACCGAATATAGTATTCTCTACTCCTCTTTCTGACCGGACAAGGACATGGAACCCTCACACTCACTACCACACTTTCTCCCATTCTAAGCACTATCTTCCTGGCTCTCTATCCGTTGCGAGGTTCTGCTTTAAGTCAGGTTTCTTGCCGGAACCTGATGGCGCCAGAGAGCTCGCCGTAGAGCTGTTAGGTCGCGCAGAGGGCCTTATCTACACTATTGCCGATGCCACCGTATCATCTTCCGAAACGGTAACAACTGCGACCGAACAGAGCAACGATTGGCTTTCAGGAATTACAAGTTATATGGAGAGTATTCTCAAGgttCTCAAGGATGGTCTTTCTACTTTGCATGTACCATATGCTTATGGTTTTGCAATTATACTTCTCACAATTCTTGTTAAGGCCGCTACATTTCCATTGACAAAGAAACAGGTAGAATCTGCTATGGCTATGCGTTCTTTGCAACCTCAAATAAAGGCAATTCAACAACGGTATGCAGGTGATCAGGAAAGAATTCAACTTGAAACTGCTCGATTGTATAAATTGGCTGGCATAAATCCTCTAGCAgGATGCCTGCCTACACTTGCAACAATACCTGTGTGGATTGGGCTATATAGAGCCCTTTCAAATGTGGCAGATGAGGGACTCCTTACAGAAGGGTTCTTCTGGATACCTTCTCTTGCTGGTCCAACTACAATTTCAGTGCGTCAAAATGGCAGTGGTATCTCTTGGCTTTTTCCGTTTGTGgatGGTCACCCACCCCTTGGATGGTCAGATACATTGGCATACCTTGTATTACCTTTGTCGCTGGTTGTCTCTCAGTACATCTCTGTCCAAATAATGCAATCAACACAGGCTAGTGATCCCAACATGAAGAGTTCTCAAACCCTAACCAAGCTTCTTCCGTTGATGATTGGTTACTTTGCTCTTTCAGTTCCTTCTGGTTTAAGTCTTTACTGGCTCACGAATAATATATTGAGCACTGCACAACAAATTTGGCTTCAAAAGCTTGGGGGCGCTCAAAATCCAATGGGGCAAGTCCGTGATGATATTTTGAAGGTTAACCCCATGCCAGTTCAGAAGTTGGTCTCTGAACTAAATCTGACAAACGAGGCCAGTGGTGAGAGGTTGACATCAGATGGGCCACGGCCTGGTGAAAGATTTAAGCAAATAAAGGAGCAAGAAGCGAGAAGAAGACagcagaaagaagaagaaaaaagaaaagctcagATGGCGGCAGCTAAAGGAACTGATGTAAATGAGGCACATGAGCAAACATTTCAAGGGGGAAATGTGACCAAAGTTGCTGTAAATGGCCAAACGTCAGACTTGGAAGGAAACCGGAATGCCACAAACGAAGCTTCCGCTCATTTCCAGACTGATGGAACAAGTGAGAAGCATTCTAATGAAGCAGTAGAATTACACACAAATACAGCTACTACGGACAAGAACCTTGCTGGGGAGGACCCACAAGAAGCGGCAAAGGATTG 1511 0.4421 MATLSQCGPNIVFSTPLSDRTRTWNPHTHYHTFSHSKHYLPGSLSVARFCFKSGFLPEPDGARELAVELLGRAEGLIYTIADATVSSSETVTTATEQSNDWLSGITSYMESILKVLKDGLSTLHVPYAYGFAIILLTILVKAATFPLTKKQVESAMAMRSLQPQIKAIQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVADEGLLTEGFFWIPSLAGPTTISVRQNGSGISWLFPFVDGHPPLGWSDTLAYLVLPLSLVVSQYISVQIMQSTQASDPNMKSSQTLTKLLPLMIGYFALSVPSGLSLYWLTNNILSTAQQIWLQKLGGAQNPMGQVRDDILKVNPMPVQKLVSELNLTNEASGERLTSDGPRPGERFKQIKEQEARRRQQKEEEKRKAQMAAAKGTDVNEAHEQTFQGGNVTKVAVNGQTSDLEGNRNATNEASAHFQTDGTSEKHSNEAVELHTNTATTDKNLAGEDPQEAAKD 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00015 503 Coils Coil 398 419 - -
Bva05g00015 503 MobiDBLite consensus disorder prediction 374 503 - -
Bva05g00015 503 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 129 343 IPR028055 -
Bva05g00015 503 MobiDBLite consensus disorder prediction 387 419 - -
Bva05g00015 503 Pfam 60Kd inner membrane protein 129 343 IPR001708 GO:0016021|GO:0032977
Bva05g00015 503 MobiDBLite consensus disorder prediction 428 469 - -
Bva05g00015 503 PANTHER OXA1 51 449 IPR001708 GO:0016021|GO:0032977
Bva05g00015 503 PANTHER BNAA09G28180D PROTEIN 51 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00015 Bva-Chr5 69293 74836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g00015 69 413 Chloroplast and Mitochondria Gene Families AT2G28800 54.728 5.50e-128 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00015 K03217 - gmx:100802546 632.869