Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g00009 ATGGAAGAAGTTTGTCTGAATAGTCAGCCAGTTTTTGGCGAAAGCGGTGAGTTTGGTGTTGCGGGTAACTCTTCTATAGTGGAACAAGATCTTAAATCTCCTAACAtacaatcaaagaaaaaccctCTGCCTCCAACAGTGGGTCTGGAGTTTGATTCTTTTGATGAAGCTTACAACTTTTACAATATGTATGCAAAGGAACAAGGTTTTGGAATTAGAGTGAGTAACTCATGGTTTAgatcaaagagaaaagagcGTTATAGAGCAAAACTTAGCTGTAGTAGTGCAGGTTTCAAGAAAAAGAGCGAAGCCAATAATCCAAGACCAGAAACAAGAACTGGTTGTCCTGCAATGATAGTCATTAAGATGCTCGACTCCAACACATGGAGGATAGTGGAAGTTGAGCTTCAACACAATCATCAAGTTAGTCCACAGATCAAACGGTTCTATAAGTCACATAAGAAAATGATCATTGCAGCCAAAAAGGCAGAACTACCACTGGAGCCTATTACAGAAATACATACCATCAAGTTATATCGAACAGCTATCATGGATGCTGCTGACATTGGATACTCTAATTGTGAACAGAGACaggatataaattttgataagcCTAAATATTTGGAACTTAAGGAAGGGGATGCCAATGCTATTTACAATTACTTTTGCCGAATGAAGTTGACCaatccaaatttcttttacttgtaTGATATTGATGATGACGGGCACCTAAGAAATGTGTTTTGGGGTGATTCAAGGTCGAGGATTGCTTTTGGTTACTTTAATGACAGCATTATGATAGACACTTCTTGTTTGGCAAACAAATATGAGATCCCACTGTTATCATTTGTTGGTGTGAACCACCATGGACAGTTTGTGCTATTGGGCTGTGCGTTCCTTGGACATGAATCAGTggataattttgtttggacATTCAAGGCATGGCTTAAATGTATGCTTGGTCGTCCTCCATGTGTTGTCATTACTGACCAGTGCAAGCCCTTGCAAACTGCAGTGGCTCAGGTTTTTCCTCATGCTCAGCACTGTTATTCCTTGCAGTATATCATGCATAGAGTTCTGGAAAAGTTGGGAGGGTTGAAGGGCTATGAAGCaatcaaaagagaattaaatagAGCTGTTTATGAGTCCCTGAAGATAGCTGAGTTTGAAACCTCTTGGGCTGGCATGATGAAACGGCATGGACTGTGGGATAACAAATGGCTTCAGACATTGTTTGAAGATAGGCGTATGTGGGTTCCAGTTTACCTAAAAGACACATTTTTTGCGGGAATGATGCCAACTCAAGAAAATGAGGCCTTGACTGCATTTTTTGATGGATATGTGCATAAACATACATCCTTTAAGGAATTTGTTGACAAATATGACCTAGCTATACACAGGAAACACTTGAAAGAAGCCATGGCGGACTTGGAATCGAGAAAATCAAACTTCAAATTGAATACAAGATGTAATTTTGAGGTTCAGCTCTCACAGGTCTATACAAAACAAATCTTTAGAAAGTTTCAATCTGAGGTTGAGGGTATGTACTCTTGCTTCAACACAAGACAGGTAAATGTTAATGGTTCtataataacatatatagTGAAAGAAAGAGTTGAAGTTGGGGGAAACGAGAAGgaagttaaaagttttgaagttTTGTATGAGACTACAAAATTGGATATTCGGTGTATTTGCAGTTTATTCAATTACAAAGGTTATTTATGCAGGCATGCATTGAATGTTCTCAATTATAATGGTGTGGAGGAAATCCCATCTCGATACATTCTGCAACGTTGGAGAAGAGATTTCAAACAAGGTTTTATTCAAGATCATGTTTCTGATGATACCGACACATCCAGCCGTGTTTACTGGCATATTCACCTTTTTAAAGATGCTCTTCGAATATTGGAAGAAGGGGCACAGTCACAGGAGCACTATATGATTGCCTTGCAAGAACTGGAGAAGTTATTAAACAACCTAGATCTAGTTGAGAATGGCTCCTTGTA 2009 0.3668 MEEVCLNSQPVFGESGEFGVAGNSSIVEQDLKSPNIQSKKNPLPPTVGLEFDSFDEAYNFYNMYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEANNPRPETRTGCPAMIVIKMLDSNTWRIVEVELQHNHQVSPQIKRFYKSHKKMIIAAKKAELPLEPITEIHTIKLYRTAIMDAADIGYSNCEQRQDINFDKPKYLELKEGDANAIYNYFCRMKLTNPNFFYLYDIDDDGHLRNVFWGDSRSRIAFGYFNDSIMIDTSCLANKYEIPLLSFVGVNHHGQFVLLGCAFLGHESVDNFVWTFKAWLKCMLGRPPCVVITDQCKPLQTAVAQVFPHAQHCYSLQYIMHRVLEKLGGLKGYEAIKRELNRAVYESLKIAEFETSWAGMMKRHGLWDNKWLQTLFEDRRMWVPVYLKDTFFAGMMPTQENEALTAFFDGYVHKHTSFKEFVDKYDLAIHRKHLKEAMADLESRKSNFKLNTRCNFEVQLSQVYTKQIFRKFQSEVEGMYSCFNTRQVNVNGSIITYIVKERVEVGGNEKEVKSFEVLYETTKLDIRCICSLFNYKGYLCRHALNVLNYNGVEEIPSRYILQRWRRDFKQGFIQDHVSDDTDTSSRVYWHIHLFKDALRILEEGAQSQEHYMIALQELEKLLNNLDLVENGSL 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g00009 669 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 25 665 IPR031052 GO:0006355
Bva05g00009 669 Pfam SWIM zinc finger 560 584 IPR007527 GO:0008270
Bva05g00009 669 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
Bva05g00009 669 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Bva05g00009 669 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6-LIKE ISOFORM X1 25 665 - -
Bva05g00009 669 SMART 26again6 562 589 IPR006564 GO:0008270
Bva05g00009 669 Pfam MULE transposase domain 265 357 IPR018289 -
Bva05g00009 669 Coils Coil 467 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g00009 Bva-Chr5 38652 43345 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva05g00009 MULE 6.1e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g00009 K17604 - gmx:100811666 1094.34