Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03487 ATGGCATCTGCGTCTTCAAATTCACCTTGTGCGGCATGTAAGTTTCTCCGGCGCAAGTGCCAACCAGAGTGCGTGTTCGCACCCTACTTCCCACCTGATCAGCCACAGAAGTTTGCAAATGTTCACAAAGTATTTGGGGCAAGCAATGTGACTAAGCTTCTGAACGAGTTACACCCTCACCAGCGAGAGGATGCTGTGAATTCCCTTGCCTATGAGGCCGATATGCGCCTCCGCGACCCCGTGTATGGTTGTGTAGGAGTCATCTCTCTCCTTCAGCACCAACTACGCCAACTTCAAATGGACCTTAGCTGCGCCAAATCCGAGCTCTCCAAGTACCAGAACCTGGGCATCACCAGCCATGGCCTCATTGCAGCCGCTGCGGCAGCCAGCTCTCATCACAACATGAACATGAATCACTACCACCACCAGTTCTTTTCTAGGGATCACCAGCAGCACATGAATATTGCGGGGAATAACTATGACGCCACTAGTCTTTTCGCCATGAACGTGTCGGCTAGCATAGGACAATTAAATCAGTTTCAGCAGCCCAGGGCTGCTGCTGCCGATGACCGCCGGACTATCGATCCCTCTTA 593 0.5211 MASASSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLSCAKSELSKYQNLGITSHGLIAAAAAASSHHNMNMNHYHHQFFSRDHQQHMNIAGNNYDATSLFAMNVSASIGQLNQFQQPRAAAADDRRTIDPS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03487 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 6-LIKE 3 152 - -
Bva04g03487 197 Coils Coil 88 115 - -
Bva04g03487 197 ProSiteProfiles LOB domain profile. 8 109 IPR004883 -
Bva04g03487 197 Pfam Lateral organ boundaries (LOB) domain 9 106 IPR004883 -
Bva04g03487 197 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 3 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03487 Bva-Chr4 27571664 27573936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03487 1 197 AS2 family AT1G65620 73.786 1.65e-90 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva04g03487 LOB 1.8e-43 No_clan